RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CENPMQ9NSP4 180 aa20.56■□□□□ 0.88
VPS16-201ENST00000380443 LOC100289279A0A1B0GTE1 492 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 C7orf66A4D0T2 115 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 CDX4O14627 284 aaPredicted RBP20.55■□□□□ 0.88
VPS16-201ENST00000380443 GLSO94925 669 aaPredicted RBP20.55■□□□□ 0.88
VPS16-201ENST00000380443 CDK2P24941 298 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 RPS15P62841 145 aaKnown RBP20.55■□□□□ 0.88
VPS16-201ENST00000380443 BTN2A1Q7KYR7 527 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 LIX1LQ8IVB5 337 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 NKAIN3Q8N8D7 197 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 OR13C3Q8NGS6 347 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 PTPRZ1P23471 2315 aaPredicted RBP20.55■□□□□ 0.88
VPS16-201ENST00000380443 GVINP1Q7Z2Y8 2422 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 LOC107986453A0A1B0GWG9 222 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 A0A1W2PPL8 197 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 WNT11O96014 354 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 P04436 131 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 SERPINA7P05543 415 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 JMJD7P0C870 316 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 TCEA1P23193 301 aaKnown RBP20.55■□□□□ 0.88
VPS16-201ENST00000380443 TAS2R20P59543 309 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 FOXK1P85037 733 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 ELFN2Q5R3F8 820 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 IZUMO1Q8IYV9 350 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 ELMOD2Q8IZ81 293 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 OR6M1Q8NGM8 313 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 OR52I2Q8NH67 350 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 INTS12Q96CB8 462 aaKnown RBP20.55■□□□□ 0.88
VPS16-201ENST00000380443 SCMH1Q96GD3 660 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 FAM206AQ9NX38 181 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 EMC3Q9P0I2 261 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 FBXL3Q9UKT7 428 aa20.55■□□□□ 0.88
VPS16-201ENST00000380443 OR2M5A3KFT3 312 aa20.54■□□□□ 0.88
VPS16-201ENST00000380443 YES1P07947 543 aa20.54■□□□□ 0.88
VPS16-201ENST00000380443 SRD5A2P31213 254 aa20.54■□□□□ 0.88
VPS16-201ENST00000380443 OTX2P32243 289 aa20.54■□□□□ 0.88
VPS16-201ENST00000380443 ZNF133P52736 654 aaPredicted RBP20.54■□□□□ 0.88
VPS16-201ENST00000380443 EIF3IQ13347 325 aaKnown RBP20.54■□□□□ 0.88
VPS16-201ENST00000380443 RAET1LQ5VY80 246 aa20.54■□□□□ 0.88
VPS16-201ENST00000380443 KCNE4Q8WWG9 221 aa20.54■□□□□ 0.88
VPS16-201ENST00000380443 FAM3DQ96BQ1 224 aa20.54■□□□□ 0.88
VPS16-201ENST00000380443 FAM210AQ96ND0 272 aa20.54■□□□□ 0.88
VPS16-201ENST00000380443 GNRHR2Q96P88 292 aa20.54■□□□□ 0.88
VPS16-201ENST00000380443 OR2M2Q96R28 347 aa20.54■□□□□ 0.88
VPS16-201ENST00000380443 MRPS18CQ9Y3D5 142 aaKnown RBP20.54■□□□□ 0.88
VPS16-201ENST00000380443 ZNF878C9JN71 531 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 OPN1LWP04000 364 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 GIFP27352 417 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 CDCP2Q5VXM1 449 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 NOXA1Q86UR1 476 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 OR56B4Q8NH76 319 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 PPP1R14AQ96A00 147 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 AUNIPQ9H7T9 357 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 RANGRFQ9HD47 186 aaPredicted RBP20.53■□□□□ 0.88
VPS16-201ENST00000380443 TAS2R8Q9NYW2 309 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 GDF2Q9UK05 429 aaPredicted RBP20.53■□□□□ 0.88
VPS16-201ENST00000380443 POLR1DQ9Y2S0 133 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 CFAP54Q96N23 3096 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 ZNF814B7Z6K7 855 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 LSM6P62312 80 aaKnown RBP20.53■□□□□ 0.88
VPS16-201ENST00000380443 SSBP1Q04837 148 aaKnown RBP20.53■□□□□ 0.88
VPS16-201ENST00000380443 TMEM164Q5U3C3 297 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 OLFML2AQ68BL7 652 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 ASPHD2Q6ICH7 369 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 TIPARPQ7Z3E1 657 aaKnown RBP20.53■□□□□ 0.88
VPS16-201ENST00000380443 SERPINA12Q8IW75 414 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 ESX1Q8N693 406 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 PTX4Q96A99 478 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 PHF21AQ96BD5 680 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 SEC61A2Q9H9S3 476 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 NUDT15Q9NV35 164 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 TAS2R4Q9NYW5 299 aa20.53■□□□□ 0.88
VPS16-201ENST00000380443 LOC390937A0A1W2PQ73 354 aa20.52■□□□□ 0.88
VPS16-201ENST00000380443 ANKRD20A5PA0PJZ0 165 aa20.52■□□□□ 0.88
VPS16-201ENST00000380443 ITGA5P08648 1049 aa20.52■□□□□ 0.88
VPS16-201ENST00000380443 QDPRP09417 244 aa20.52■□□□□ 0.88
VPS16-201ENST00000380443 CD59P13987 128 aa20.52■□□□□ 0.88
VPS16-201ENST00000380443 HTR2CP28335 458 aa20.52■□□□□ 0.88
VPS16-201ENST00000380443 GUCA1AP43080 201 aaPredicted RBP20.52■□□□□ 0.88
VPS16-201ENST00000380443 POU3F4P49335 361 aa20.52■□□□□ 0.88
VPS16-201ENST00000380443 GABREP78334 506 aa20.52■□□□□ 0.88
VPS16-201ENST00000380443 C2orf76Q3KRA6 126 aa20.52■□□□□ 0.88
VPS16-201ENST00000380443 C1orf100Q5SVJ3 147 aa20.52■□□□□ 0.88
VPS16-201ENST00000380443 CORO6Q6QEF8 472 aa20.52■□□□□ 0.88
VPS16-201ENST00000380443 PNPLA2Q96AD5 504 aa20.52■□□□□ 0.88
VPS16-201ENST00000380443 SF3B5Q9BWJ5 86 aaKnown RBP20.52■□□□□ 0.88
VPS16-201ENST00000380443 GPR87Q9BY21 358 aa20.52■□□□□ 0.88
VPS16-201ENST00000380443 HRASLSQ9HDD0 168 aa20.52■□□□□ 0.88
VPS16-201ENST00000380443 GLTPQ9NZD2 209 aa20.52■□□□□ 0.88
VPS16-201ENST00000380443 LHFPL6Q9Y693 200 aa20.52■□□□□ 0.88
VPS16-201ENST00000380443 A0A0A6YYH2 397 aa20.51■□□□□ 0.87
VPS16-201ENST00000380443 A6NJ64 397 aa20.51■□□□□ 0.87
VPS16-201ENST00000380443 H0YC42 278 aa20.51■□□□□ 0.87
VPS16-201ENST00000380443 CTAG2O75638 210 aa20.51■□□□□ 0.87
VPS16-201ENST00000380443 H2AFB2P0C5Z0 115 aa20.51■□□□□ 0.87
VPS16-201ENST00000380443 PSMA6P60900 246 aaKnown RBP20.51■□□□□ 0.87
VPS16-201ENST00000380443 MAB21L1Q13394 359 aa20.51■□□□□ 0.87
VPS16-201ENST00000380443 RNASE12Q5GAN4 147 aaKnown RBP20.51■□□□□ 0.87
VPS16-201ENST00000380443 C10orf128Q5T292 105 aa20.51■□□□□ 0.87
VPS16-201ENST00000380443 JMJD6Q6NYC1 403 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms