RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 NUDT11Q96G61 164 aa6.76□□□□□ -1.33
CDKL5-201ENST00000379989 FAHD2AQ96GK7 314 aa6.76□□□□□ -1.33
CDKL5-201ENST00000379989 RCC1LQ96I51 464 aaKnown RBP6.76□□□□□ -1.33
CDKL5-201ENST00000379989 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.76□□□□□ -1.33
CDKL5-201ENST00000379989 AMDHD2Q9Y303 409 aa6.76□□□□□ -1.33
CDKL5-201ENST00000379989 PLRG1O43660 514 aaKnown RBP6.75□□□□□ -1.33
CDKL5-201ENST00000379989 TBX19O60806 448 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 PIAS2O75928 621 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 RAB6AP20340 208 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 CDK2P24941 298 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 DPP4P27487 766 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 EIF5AL1Q6IS14 154 aaKnown RBP6.75□□□□□ -1.33
CDKL5-201ENST00000379989 DNM1P46Q6ZS02 220 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 BIVMQ86UB2 503 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 LYG1Q8N1E2 194 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 TMEM99Q8N816 258 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 OR4K5Q8NGD3 323 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 OR1J2Q8NGS2 313 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 CD300LFQ8TDQ1 290 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 AUTS2Q8WXX7 1259 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 BADQ92934 168 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 HLA-CQ95604 372 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 SLC41A3Q96GZ6 507 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 ZNF845Q96IR2 970 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-201ENST00000379989 SNX22Q96L94 193 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 SLC2A4RGQ9NR83 387 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 ARL15Q9NXU5 204 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 GXYLT2A0PJZ3 443 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 C20orf202A1L168 122 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 MGAT4DA6NG13 374 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 K7ERQ8 282 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 SOCS6O14544 535 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 CYB5BO43169 146 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 RAMP1O60894 148 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 BPNT1O95861 308 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 PNPP00491 289 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 ITGB2P05107 769 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 IL3P08700 152 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 MAOAP21397 527 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 CCR2P41597 374 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 SLC6A9P48067 706 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 GPM6BQ13491 265 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 CLEC12AQ5QGZ9 265 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 EXOSC6Q5RKV6 272 aaKnown RBP6.75□□□□□ -1.33
CDKL5-201ENST00000379989 ERN2Q76MJ5 926 aaKnown RBP6.75□□□□□ -1.33
CDKL5-201ENST00000379989 OR13C2Q8NGS9 318 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 FAM131CQ96AQ9 280 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 ELSPBP1Q96BH3 223 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 ADAD1Q96M93 576 aaKnown RBP6.75□□□□□ -1.33
CDKL5-201ENST00000379989 PCED1AQ9H1Q7 454 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 MSL2Q9HCI7 577 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 BPIFA1Q9NP55 256 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 PARP11Q9NR21 331 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 PLA2G2EQ9NZK7 142 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 ZNF282Q9UDV7 671 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-201ENST00000379989 KCNG2Q9UJ96 466 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 HEATR5AQ86XA9 2040 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 KCNE1BA0A087WTH5 132 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 GMFGO60234 142 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 CST2P09228 141 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 ACRP10323 421 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 PNLIPP16233 465 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 EPCAMP16422 314 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 HLA-GP17693 338 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 CD34P28906 385 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 HTR1FP30939 366 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 IGFALSP35858 605 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 CLDN12P56749 244 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 KLF3P57682 345 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-201ENST00000379989 RGS8P57771 180 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-201ENST00000379989 TAS2R20P59543 309 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 ACTBP60709 375 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 ACTA2P62736 377 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 ACTG1P63261 375 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 ACTG2P63267 376 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 ACTC1P68032 377 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 ACTA1P68133 377 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 PIN1Q13526 163 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-201ENST00000379989 SYPL1Q16563 259 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 C4orf17Q53FE4 359 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 RPS26P11Q5JNZ5 115 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-201ENST00000379989 ENTPD8Q5MY95 495 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 C1orf194Q5T5A4 169 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 ZNF705AQ6ZN79 300 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-201ENST00000379989 MTSS1LQ765P7 747 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 TMEM183AQ8IXX5 376 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 GALNT16Q8N428 558 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 SYNPRQ8TBG9 265 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 DCUN1D4Q92564 292 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 GFI1Q99684 422 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 GPR87Q9BY21 358 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 OR51I1Q9H343 314 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 OR2S2Q9NQN1 319 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 THAP10Q9P2Z0 257 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-201ENST00000379989 URGCP-MRPS24S4R325 110 aa6.75□□□□□ -1.33
CDKL5-201ENST00000379989 MASP2O00187 686 aa6.74□□□□□ -1.33
CDKL5-201ENST00000379989 PEX12O00623 359 aa6.74□□□□□ -1.33
CDKL5-201ENST00000379989 TMEM127O75204 238 aa6.74□□□□□ -1.33
CDKL5-201ENST00000379989 LEFTY1O75610 366 aa6.74□□□□□ -1.33
CDKL5-201ENST00000379989 OR2J2O76002 312 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms