RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 SLC39A7Q92504 469 aa17.3■□□□□ 0.36
SSU72-204ENST00000378726 DACT3Q96B18 629 aaPredicted RBP17.3■□□□□ 0.36
SSU72-204ENST00000378726 SORCS2Q96PQ0 1159 aa17.3■□□□□ 0.36
SSU72-204ENST00000378726 RBP7Q96R05 134 aa17.3■□□□□ 0.36
SSU72-204ENST00000378726 AMELYQ99218 206 aa17.3■□□□□ 0.36
SSU72-204ENST00000378726 EIF3KQ9UBQ5 218 aaKnown RBP17.3■□□□□ 0.36
SSU72-204ENST00000378726 AK6Q9Y3D8 172 aaKnown RBP17.3■□□□□ 0.36
SSU72-204ENST00000378726 MEIKINA0A087WXM9 373 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 IGKV1D-43A0A0B4J1Z2 117 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 TRABD2BA6NFA1 517 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 ABHD16AO95870 558 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 SPARCP09486 303 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 SULT1A3P0DMM9 295 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 SULT1A4P0DMN0 295 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 ZNF43P17038 809 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 SSTR2P30874 369 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 RPS11P62280 158 aaKnown RBP eCLIP17.29■□□□□ 0.36
SSU72-204ENST00000378726 KLF9Q13886 244 aaPredicted RBP17.29■□□□□ 0.36
SSU72-204ENST00000378726 POU4F3Q15319 338 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 LRRC69Q6ZNQ3 347 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 FER1L6-AS2Q96M78 137 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 LRFN3Q9BTN0 628 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 DPCDQ9BVM2 203 aaPredicted RBP17.29■□□□□ 0.36
SSU72-204ENST00000378726 NARFLQ9H6Q4 476 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 AUNIPQ9H7T9 357 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 GLTPQ9NZD2 209 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 ABRACLQ9P1F3 81 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 GPRIN2O60269 458 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 CD82P27701 267 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 PTGS2P35354 604 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 NBL1P41271 181 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 SLC18B1Q6NT16 456 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 BTN2A1Q7KYR7 527 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 OR14L1PQ8NHC6 308 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 PCNPQ8WW12 178 aaKnown RBP17.29■□□□□ 0.36
SSU72-204ENST00000378726 MRPL13Q9BYD1 178 aaKnown RBP17.29■□□□□ 0.36
SSU72-204ENST00000378726 ZCCHC4Q9H5U6 513 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 DLL4Q9NR61 685 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 MRPL15Q9P015 296 aaKnown RBP17.29■□□□□ 0.36
SSU72-204ENST00000378726 COPZ2Q9P299 210 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 CAMK2AQ9UQM7 478 aa17.29■□□□□ 0.36
SSU72-204ENST00000378726 LOC102725191A0A1B0GVB3 256 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 LRRC3CA6NJW4 275 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 CDRT15L2A8MXV6 281 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 TRAF3IP2O43734 574 aaPredicted RBP17.28■□□□□ 0.36
SSU72-204ENST00000378726 KHDRBS3O75525 346 aaKnown RBP17.28■□□□□ 0.36
SSU72-204ENST00000378726 TRAPPC6AO75865 159 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 NEURL1O76050 574 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 HPXP02790 462 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 CASRP41180 1078 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 B3GALT5-AS1P59052 145 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 H3F3AP84243 136 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 SNTB2Q13425 540 aaKnown RBP17.28■□□□□ 0.36
SSU72-204ENST00000378726 CLEC1AQ8NC01 280 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 RPS4Y2Q8TD47 263 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 ASB17Q8WXJ9 295 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 NSMAFQ92636 917 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 SLC25A44Q96H78 314 aaPredicted RBP17.28■□□□□ 0.36
SSU72-204ENST00000378726 UTP23Q9BRU9 249 aaKnown RBP17.28■□□□□ 0.36
SSU72-204ENST00000378726 ABI3Q9P2A4 366 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 NUP50Q9UKX7 468 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 ZNF281Q9Y2X9 895 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 AUP1Q9Y679 476 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 PINLYPA6NC86 204 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 ZFPL1O95159 310 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 ADRB1P08588 477 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 ZNF823P16415 610 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 ZP1P60852 638 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 ALKBH1Q13686 389 aaKnown RBP17.28■□□□□ 0.36
SSU72-204ENST00000378726 LINC00696Q6ZRV3 163 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 PIAS4Q8N2W9 510 aaPredicted RBP17.28■□□□□ 0.36
SSU72-204ENST00000378726 SLC26A10Q8NG04 563 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 SIGLEC12Q96PQ1 595 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 OR14A2Q96R54 314 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 PTTG3PQ9NZH4 202 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 FRRS1LQ9P0K9 344 aa17.28■□□□□ 0.36
SSU72-204ENST00000378726 A0A0J9YW62 118 aa17.27■□□□□ 0.36
SSU72-204ENST00000378726 SSNA1O43805 119 aa17.27■□□□□ 0.36
SSU72-204ENST00000378726 MPC2O95563 127 aa17.27■□□□□ 0.36
SSU72-204ENST00000378726 DNASE1P24855 282 aa17.27■□□□□ 0.36
SSU72-204ENST00000378726 CLRN1P58418 232 aa17.27■□□□□ 0.36
SSU72-204ENST00000378726 THEM4Q5T1C6 240 aa17.27■□□□□ 0.36
SSU72-204ENST00000378726 LRRN1Q6UXK5 716 aa17.27■□□□□ 0.36
SSU72-204ENST00000378726 LGALS14Q8TCE9 139 aa17.27■□□□□ 0.36
SSU72-204ENST00000378726 ORAI1Q96D31 301 aa17.27■□□□□ 0.36
SSU72-204ENST00000378726 OR8B4Q96RC9 309 aa17.27■□□□□ 0.36
SSU72-204ENST00000378726 ELOVL3Q9HB03 270 aa17.27■□□□□ 0.36
SSU72-204ENST00000378726 NKIRAS2Q9NYR9 191 aa17.27■□□□□ 0.36
SSU72-204ENST00000378726 PLA2G3Q9NZ20 509 aa17.27■□□□□ 0.36
SSU72-204ENST00000378726 KLHL13Q9P2N7 655 aa17.27■□□□□ 0.36
SSU72-204ENST00000378726 SPATA2Q9UM82 520 aa17.27■□□□□ 0.36
SSU72-204ENST00000378726 FLVCR2Q9UPI3 526 aa17.27■□□□□ 0.36
SSU72-204ENST00000378726 A0A1B0GTH9 108 aa17.27■□□□□ 0.35
SSU72-204ENST00000378726 GSTZ1O43708 216 aaPredicted RBP17.27■□□□□ 0.35
SSU72-204ENST00000378726 EIF1BO60739 113 aaKnown RBP17.27■□□□□ 0.35
SSU72-204ENST00000378726 GATBO75879 557 aaKnown RBP17.27■□□□□ 0.35
SSU72-204ENST00000378726 UCHL1P09936 223 aa17.27■□□□□ 0.35
SSU72-204ENST00000378726 GDNFP39905 211 aa17.27■□□□□ 0.35
SSU72-204ENST00000378726 ZNF81P51508 661 aa17.27■□□□□ 0.35
SSU72-204ENST00000378726 CSNK2A1P68400 391 aaPredicted RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms