RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 NUDT9Q9BW91 350 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 ZMAT3Q9HA38 289 aaKnown RBP7.96□□□□□ -1.13
PCDH9-202ENST00000377865 KCNG2Q9UJ96 466 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 RPH3AQ9Y2J0 694 aaPredicted RBP7.96□□□□□ -1.13
PCDH9-202ENST00000377865 PCDHGA9Q9Y5G4 932 aaKnown RBP7.96□□□□□ -1.13
PCDH9-202ENST00000377865 UMAD1C9J7I0 102 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 E5RGE8 158 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 CDC42EP2O14613 210 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 TO15178 435 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 NSA2O95478 260 aaKnown RBP7.96□□□□□ -1.13
PCDH9-202ENST00000377865 APOBEC1P41238 236 aaKnown RBP7.96□□□□□ -1.13
PCDH9-202ENST00000377865 MRPS21P82921 87 aaKnown RBP7.96□□□□□ -1.13
PCDH9-202ENST00000377865 ACY1Q03154 408 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 PJVKQ0ZLH3 352 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 NHLRC1Q6VVB1 395 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 RBMS3Q6XE24 437 aaKnown RBP7.96□□□□□ -1.13
PCDH9-202ENST00000377865 WDR5BQ86VZ2 330 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 C1orf87Q8N0U7 546 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 C15orf54Q8N8G6 183 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 OR5M8Q8NGP6 311 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 RAB39BQ96DA2 213 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 SIGLEC11Q96RL6 698 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 RBM24Q9BX46 236 aaKnown RBP7.96□□□□□ -1.13
PCDH9-202ENST00000377865 ENKD1Q9H0I2 346 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 RAB18Q9NP72 206 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 DNAJB12Q9NXW2 375 aaKnown RBP7.96□□□□□ -1.13
PCDH9-202ENST00000377865 VSX1Q9NZR4 365 aaPredicted RBP7.96□□□□□ -1.13
PCDH9-202ENST00000377865 NSG2Q9Y328 171 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 OR5K3A6NET4 321 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 LANCL1O43813 399 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 SFTA3P0C7M3 94 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 RPL12P30050 165 aaKnown RBP7.96□□□□□ -1.14
PCDH9-202ENST00000377865 BIDP55957 195 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 PCBD1P61457 104 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 RPP30P78346 268 aaKnown RBP7.96□□□□□ -1.14
PCDH9-202ENST00000377865 MRPL49Q13405 166 aaKnown RBP7.96□□□□□ -1.14
PCDH9-202ENST00000377865 GGTLC2Q14390 218 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 ZNF345Q14585 488 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 PHF19Q5T6S3 580 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 KIAA0895LQ68EN5 471 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 ARRDC1Q8N5I2 433 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 FAM3CQ92520 227 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 FBXW5Q969U6 566 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 MED9Q9NWA0 146 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 TDRD15B5MCY1 1934 aaKnown RBP7.96□□□□□ -1.14
PCDH9-202ENST00000377865 LRP5LA4QPB2 252 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 DDAH2O95865 285 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 FCGR2CP31995 323 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 SLC35A1P78382 337 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 AKR1C1Q04828 323 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 TMEM128Q5BJH2 165 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 HIST2H3PS2Q5TEC6 136 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 ZNF426Q9BUY5 554 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 PLEK2Q9NYT0 353 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 KCNIP1Q9NZI2 227 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 GHRLQ9UBU3 117 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 TBC1D29Q9UFV1 150 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 ZNF223Q9UK11 482 aaPredicted RBP7.96□□□□□ -1.14
PCDH9-202ENST00000377865 PCDHB10Q9UN67 800 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 SF3B6Q9Y3B4 125 aaKnown RBP7.96□□□□□ -1.14
PCDH9-202ENST00000377865 MFSD2BA6NFX1 497 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 PRRT4C9JH25 899 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 RNASEK-C17orf49H0YIS7 233 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 DFFBO76075 338 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 EPHA1P21709 976 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 FPR2P25090 351 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 CD80P33681 288 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 SFTPDP35247 375 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 PPICP45877 212 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 ACKR1Q16570 336 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 LRIT1Q9P2V4 623 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 OPN4Q9UHM6 478 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 RARRES3Q9UL19 164 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 ANKRD36A6QL64 1941 aa7.96□□□□□ -1.14
PCDH9-202ENST00000377865 TRAPPC6AO75865 159 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 TK1P04183 234 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 ITGB2P05107 769 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 RAC2P15153 192 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 FOLR1P15328 257 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 MSX1P28360 303 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 MEOX2P50222 304 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 TOMM34Q15785 309 aaPredicted RBP7.95□□□□□ -1.14
PCDH9-202ENST00000377865 CST9Q5W186 159 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 PLCXD3Q63HM9 321 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 MRM1Q6IN84 353 aaKnown RBP7.95□□□□□ -1.14
PCDH9-202ENST00000377865 PWWP2BQ6NUJ5 590 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 TP53I13Q8NBR0 393 aaPredicted RBP7.95□□□□□ -1.14
PCDH9-202ENST00000377865 OR5M9Q8NGP3 310 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 OR1S2Q8NGQ3 325 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 NANPQ8TBE9 248 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 SPACA1Q9HBV2 294 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 PIAS3Q9Y6X2 628 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 PLRG1O43660 514 aaKnown RBP7.95□□□□□ -1.14
PCDH9-202ENST00000377865 CCNOP22674 350 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 HOXA1P49639 335 aaPredicted RBP7.95□□□□□ -1.14
PCDH9-202ENST00000377865 PDCD11Q14690 1871 aaKnown RBP7.95□□□□□ -1.14
PCDH9-202ENST00000377865 ISXQ2M1V0 245 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 TMEM88Q6PEY1 159 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 MARCH3Q86UD3 253 aa7.95□□□□□ -1.14
PCDH9-202ENST00000377865 ORAI1Q96D31 301 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms