RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 LY6G6FQ5SQ64 297 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 DNM1P34Q6PK57 102 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 ZNF704Q6ZNC4 412 aaPredicted RBP22.63■■□□□ 1.21
C9orf40-201ENST00000376854 ST7LQ8TDW4 575 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 ASB10Q8WXI3 467 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 NPAS1Q99742 590 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 SPAG17Q6Q759 2223 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 CPAMD8Q8IZJ3 1885 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 PCNX3Q9H6A9 2034 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 NPIPA5E9PKD4 350 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 MBTPS2O43462 519 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 AQP8O94778 261 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 TAGLNQ01995 201 aaKnown RBP22.63■■□□□ 1.21
C9orf40-201ENST00000376854 TDGQ13569 410 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 C1orf100Q5SVJ3 147 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 ATPAF1Q5TC12 328 aaPredicted RBP22.63■■□□□ 1.21
C9orf40-201ENST00000376854 PXDC1Q5TGL8 231 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 BPIFB2Q8N4F0 458 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 OR1J2Q8NGS2 313 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 OR6K3Q8NGY3 331 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 TMEM234Q8WY98 164 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 KLK13Q9UKR3 277 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 NPIPA1Q9UND3 350 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 TRAV14DV4A0A0A6YYC5 116 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 C2orf72A6NCS6 295 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 TMEM235A6NFC5 223 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 ADAM10O14672 748 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 CD74P04233 296 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 HOXD4P09016 255 aaPredicted RBP22.62■■□□□ 1.21
C9orf40-201ENST00000376854 ZNF28P17035 718 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 CFHR1Q03591 330 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 UBXN2BQ14CS0 331 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 SCGB2B2Q4G0G5 96 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 SHISA6Q6ZSJ9 500 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 STEAP2Q8NFT2 490 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 OR4D6Q8NGJ1 314 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 B3GNT4Q9C0J1 378 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 COL5A1P20908 1838 aaPredicted RBP22.62■■□□□ 1.21
C9orf40-201ENST00000376854 IGHV1OR21-1A0A087WYE8 117 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 A0A1B0GX78 115 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 LOC390937A0A1W2PQ73 354 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 MYF5P13349 255 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 OR7A5Q15622 319 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 TUSC1Q2TAM9 212 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 CLVS2Q5SYC1 327 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 C16orf47Q6ZP98 133 aaPredicted RBP22.62■■□□□ 1.21
C9orf40-201ENST00000376854 WDFY1Q8IWB7 410 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 NKAIN3Q8N8D7 197 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 ACBD4Q8NC06 268 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 NKD1Q969G9 470 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 ARL5BQ96KC2 179 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 FBXL2Q9UKC9 423 aa22.62■■□□□ 1.21
C9orf40-201ENST00000376854 LOC101059948A0A1B0GTJ6 334 aa22.61■■□□□ 1.21
C9orf40-201ENST00000376854 P2RY10O00398 339 aa22.61■■□□□ 1.21
C9orf40-201ENST00000376854 SPDEFO95238 335 aa22.61■■□□□ 1.21
C9orf40-201ENST00000376854 MPGP29372 298 aa22.61■■□□□ 1.21
C9orf40-201ENST00000376854 DAP3P51398 398 aaKnown RBP22.61■■□□□ 1.21
C9orf40-201ENST00000376854 TMEM244Q5VVB8 128 aa22.61■■□□□ 1.21
C9orf40-201ENST00000376854 SLC51BQ86UW2 128 aa22.61■■□□□ 1.21
C9orf40-201ENST00000376854 HIST2H2ABQ8IUE6 130 aaPredicted RBP22.61■■□□□ 1.21
C9orf40-201ENST00000376854 ZNF584Q8IVC4 421 aa22.61■■□□□ 1.21
C9orf40-201ENST00000376854 D2HGDHQ8N465 521 aa22.61■■□□□ 1.21
C9orf40-201ENST00000376854 EDAQ92838 391 aa22.61■■□□□ 1.21
C9orf40-201ENST00000376854 PTX4Q96A99 478 aa22.61■■□□□ 1.21
C9orf40-201ENST00000376854 DMRTA2Q96SC8 542 aa22.61■■□□□ 1.21
C9orf40-201ENST00000376854 MYOZ1Q9NP98 299 aaPredicted RBP22.61■■□□□ 1.21
C9orf40-201ENST00000376854 CENPMQ9NSP4 180 aa22.61■■□□□ 1.21
C9orf40-201ENST00000376854 CTSFQ9UBX1 484 aa22.61■■□□□ 1.21
C9orf40-201ENST00000376854 ZNF230Q9UIE0 474 aaPredicted RBP22.61■■□□□ 1.21
C9orf40-201ENST00000376854 ZNF107Q9UII5 783 aaPredicted RBP22.61■■□□□ 1.21
C9orf40-201ENST00000376854 FBXO4Q9UKT5 387 aa22.61■■□□□ 1.21
C9orf40-201ENST00000376854 IGKV1D-43A0A0B4J1Z2 117 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 IGHV3-20A0A0C4DH32 117 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 A8MXK9 166 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 NUDT21O43809 227 aaKnown RBP22.6■■□□□ 1.21
C9orf40-201ENST00000376854 CSN2P05814 226 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 PRKACBP22694 351 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 FOXL2P58012 376 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 PCK2Q16822 640 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 PAPD4Q6PIY7 484 aaKnown RBP22.6■■□□□ 1.21
C9orf40-201ENST00000376854 CORO6Q6QEF8 472 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 PLXDC1Q8IUK5 500 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 PDZD9Q8IXQ8 264 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 BEST3Q8N1M1 668 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 OR5M9Q8NGP3 310 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 SLC6A7Q99884 636 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 EDEM2Q9BV94 578 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 FOXQ1Q9C009 403 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 GDF2Q9UK05 429 aaPredicted RBP22.6■■□□□ 1.21
C9orf40-201ENST00000376854 FREM3P0C091 2139 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 RP1P56715 2156 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 TEX46H3BTG2 121 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 H2BFMP0C1H6 154 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 CSNK1EP49674 416 aaKnown RBP22.6■■□□□ 1.21
C9orf40-201ENST00000376854 ZP4Q12836 540 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 H1FNTQ75WM6 255 aaPredicted RBP22.6■■□□□ 1.21
C9orf40-201ENST00000376854 ZNF546Q86UE3 836 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 LYPD6Q86Y78 171 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 TDHQ8IZJ6 230 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 OR4S1Q8NGB4 309 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms