RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 KIDINS220Q9ULH0 1771 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 EFSO43281 561 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 RPEL1Q2QD12 228 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 RANBP10Q6VN20 620 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 Q6ZSR6 202 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 OSTM1Q86WC4 334 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 ZNF583Q96ND8 569 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 ZPBPQ9BS86 351 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 GCGP01275 180 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 ACKR1Q16570 336 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 ABI3BPQ7Z7G0 1075 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 ZMAT3Q9HA38 289 aaKnown RBP10.69□□□□□ -0.7
VPS13A-205ENST00000376636 SLC23A1Q9UHI7 598 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 PPP1R3CQ9UQK1 317 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 MYOM1P52179 1685 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 HEPACAM2A8MVW5 462 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 DUS4LO95620 317 aaKnown RBP10.69□□□□□ -0.7
VPS13A-205ENST00000376636 SLC25A4P12235 298 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 ELAVL4P26378 380 aaKnown RBP10.69□□□□□ -0.7
VPS13A-205ENST00000376636 SLC10A2Q12908 348 aaPredicted RBP10.69□□□□□ -0.7
VPS13A-205ENST00000376636 MTURNQ8N3F0 131 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 BMP5P22003 454 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 TGFBR1P36897 503 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 TNFRSF4P43489 277 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 OLIG1Q8TAK6 271 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 ZDHHC5Q9C0B5 715 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 SHPRHQ149N8 1683 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 M0R1X1 148 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 SFTA3P0C7M3 94 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 ZNF140P52738 457 aaPredicted RBP10.68□□□□□ -0.7
VPS13A-205ENST00000376636 DHODHQ02127 395 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 SHHQ15465 462 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 C18orf21Q32NC0 220 aaPredicted RBP10.68□□□□□ -0.7
VPS13A-205ENST00000376636 KIAA1958Q8N8K9 716 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 SORT1Q99523 831 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 PLA2G12AQ9BZM1 189 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 SNRPGP15A8MWD9 76 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 UQCRFS1P47985 274 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 SLC38A5Q8WUX1 472 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 IGSF8Q969P0 613 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 NMNAT3Q96T66 252 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 RHOFQ9HBH0 211 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 PRSS16Q9NQE7 514 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 DUSP13Q9UII6 198 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 A0A0A6YYC8 382 aaPredicted RBP10.68□□□□□ -0.7
VPS13A-205ENST00000376636 I3L1I5 382 aaPredicted RBP10.68□□□□□ -0.7
VPS13A-205ENST00000376636 ANKRD34CP0C6C1 535 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 ALOX5APP20292 161 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 GCAP28676 217 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 C9orf135Q5VTT2 229 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 CPPED1Q9BRF8 314 aaPredicted RBP10.68□□□□□ -0.7
VPS13A-205ENST00000376636 P2RY2P41231 377 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 HLXQ14774 488 aaPredicted RBP10.68□□□□□ -0.7
VPS13A-205ENST00000376636 Q6ZN92 141 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 MFSD4AQ8N468 514 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 SLC38A9Q8NBW4 561 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 OR4C16Q8NGL9 310 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 NAT8BQ9UHF3 227 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 SEC16AO15027 2179 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 CDC14CA4D256 554 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 HSPB2A8KAH6 182 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 P2RY10O00398 339 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 HSPB2Q16082 182 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 STUMQ69YW2 141 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 VASH2Q86V25 355 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 FAM72CH0Y354 149 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 SOD1P00441 154 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 HPP00738 406 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 FAM72AQ5TYM5 149 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 FAM72DQ6L9T8 149 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 FAM72BQ86X60 149 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 ARHGEF39Q8N4T4 335 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 TMED6Q8WW62 240 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 NRG4Q8WWG1 115 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 CMBLQ96DG6 245 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 ATP5SQ99766 215 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 SNX11Q9Y5W9 270 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 GRPP07492 148 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 EMC4Q5J8M3 183 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 GGTA1PQ4G0N0 100 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 SHISA6Q6ZSJ9 500 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 MAP1LC3CQ9BXW4 147 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 HES4Q9HCC6 221 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 GPR37O15354 613 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 CD14P08571 375 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 CTU2Q2VPK5 515 aaKnown RBP10.68□□□□□ -0.7
VPS13A-205ENST00000376636 SOWAHCQ53LP3 525 aaPredicted RBP10.68□□□□□ -0.7
VPS13A-205ENST00000376636 C11orf40Q8WZ69 217 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 HSFX1Q9UBD0 423 aa10.68□□□□□ -0.7
VPS13A-205ENST00000376636 PRSS38A1L453 326 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 KLRC4-KLRK1H3BQV0 150 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 TFAP2AP05549 437 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 RUNX3Q13761 415 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 GGNBP1Q5YKI7 109 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 ZNF66Q6ZN08 573 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 ZBTB44Q8NCP5 570 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 DYRK2Q92630 601 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 PSENENQ9NZ42 101 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 SLCO1B1Q9Y6L6 691 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 GJA4P35212 333 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms