RNA–Protein interactions for RNA: ENST00000376497.7

CLCN6-207, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 3 BASIC

Gene CLCN6, Length 814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-207ENST00000376497 SLC9A3P48764 834 aa12.91□□□□□ -0.34
CLCN6-207ENST00000376497 FXYD6P3P58550 94 aa12.91□□□□□ -0.34
CLCN6-207ENST00000376497 CDK5R2Q13319 367 aa12.91□□□□□ -0.34
CLCN6-207ENST00000376497 ZMAT1Q5H9K5 638 aa12.91□□□□□ -0.34
CLCN6-207ENST00000376497 MTX3Q5HYI7 312 aa12.91□□□□□ -0.34
CLCN6-207ENST00000376497 RBMS3Q6XE24 437 aaKnown RBP12.91□□□□□ -0.34
CLCN6-207ENST00000376497 FOXL2NBQ6ZUU3 175 aa12.91□□□□□ -0.34
CLCN6-207ENST00000376497 ZNF771Q7L3S4 317 aaPredicted RBP12.91□□□□□ -0.34
CLCN6-207ENST00000376497 FNDC8Q8TC99 324 aa12.91□□□□□ -0.34
CLCN6-207ENST00000376497 RASD2Q96D21 266 aa12.91□□□□□ -0.34
CLCN6-207ENST00000376497 C4orf45Q96LM5 186 aa12.91□□□□□ -0.34
CLCN6-207ENST00000376497 Q96M85 177 aa12.91□□□□□ -0.34
CLCN6-207ENST00000376497 GPA33Q99795 319 aa12.91□□□□□ -0.34
CLCN6-207ENST00000376497 ALG12Q9BV10 488 aa12.91□□□□□ -0.34
CLCN6-207ENST00000376497 ELOVL3Q9HB03 270 aa12.91□□□□□ -0.34
CLCN6-207ENST00000376497 PATZ1Q9HBE1 687 aaKnown RBP12.91□□□□□ -0.34
CLCN6-207ENST00000376497 MSL2Q9HCI7 577 aa12.91□□□□□ -0.34
CLCN6-207ENST00000376497 SPAG4Q9NPE6 437 aa12.91□□□□□ -0.34
CLCN6-207ENST00000376497 MMP26Q9NRE1 261 aa12.91□□□□□ -0.34
CLCN6-207ENST00000376497 DCAF13Q9NV06 445 aaKnown RBP12.91□□□□□ -0.34
CLCN6-207ENST00000376497 PLEK2Q9NYT0 353 aa12.91□□□□□ -0.34
CLCN6-207ENST00000376497 PURGQ9UJV8 347 aaKnown RBP12.91□□□□□ -0.34
CLCN6-207ENST00000376497 DOCK11Q5JSL3 2073 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 TRAPPC2LH3BP13 241 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 SEMG1P04279 462 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 SBK2P0C263 348 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 ZNF12P17014 697 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 LAP3P28838 519 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 RBMXP38159 391 aaKnown RBP12.9□□□□□ -0.34
CLCN6-207ENST00000376497 ARHGDIAP52565 204 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 TNFAIP6P98066 277 aaPredicted RBP12.9□□□□□ -0.34
CLCN6-207ENST00000376497 PSG7Q13046 419 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 ZNF154Q13106 437 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 TMEM155Q4W5P6 130 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 MESTQ5EB52 335 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 ARMCX4Q5H9R4 360 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 FGD3Q5JSP0 725 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 KLF17Q5JT82 389 aaPredicted RBP12.9□□□□□ -0.34
CLCN6-207ENST00000376497 TMPRSS11FQ6ZWK6 438 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 SYT9Q86SS6 491 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 SPICQ8N5J4 248 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 ZNF283Q8N7M2 679 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 CCDC197Q8NCU1 140 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 OR52J3Q8NH60 311 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 C1orf147Q96MC9 270 aaPredicted RBP12.9□□□□□ -0.34
CLCN6-207ENST00000376497 RBP7Q96R05 134 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 DCLRE1CQ96SD1 692 aaKnown RBP12.9□□□□□ -0.34
CLCN6-207ENST00000376497 FUZQ9BT04 418 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 EMC7Q9NPA0 242 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 TMEM106BQ9NUM4 274 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 DCAF16Q9NXF7 216 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 ZNF69Q9UC07 566 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 TIMM10BQ9Y5J6 103 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 INSIG2Q9Y5U4 225 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 AUP1Q9Y679 476 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 TRRAPQ9Y4A5 3859 aa12.9□□□□□ -0.34
CLCN6-207ENST00000376497 A0A1W2PPL8 197 aa12.89□□□□□ -0.35
CLCN6-207ENST00000376497 A8MXK9 166 aa12.89□□□□□ -0.35
CLCN6-207ENST00000376497 H1F0P07305 194 aaKnown RBP12.89□□□□□ -0.35
CLCN6-207ENST00000376497 TUBG1P23258 451 aa12.89□□□□□ -0.35
CLCN6-207ENST00000376497 OMPP47874 163 aa12.89□□□□□ -0.35
CLCN6-207ENST00000376497 SLC6A9P48067 706 aa12.89□□□□□ -0.35
CLCN6-207ENST00000376497 PCBD1P61457 104 aa12.89□□□□□ -0.35
CLCN6-207ENST00000376497 ENDOGQ14249 297 aaKnown RBP12.89□□□□□ -0.35
CLCN6-207ENST00000376497 FAM122BQ7Z309 247 aa12.89□□□□□ -0.35
CLCN6-207ENST00000376497 ZER1Q7Z7L7 766 aa12.89□□□□□ -0.35
CLCN6-207ENST00000376497 LRRC28Q86X40 367 aaPredicted RBP12.89□□□□□ -0.35
CLCN6-207ENST00000376497 KLHL36Q8N4N3 616 aa12.89□□□□□ -0.35
CLCN6-207ENST00000376497 SAMD8Q96LT4 415 aa12.89□□□□□ -0.35
CLCN6-207ENST00000376497 WACQ9BTA9 647 aa12.89□□□□□ -0.35
CLCN6-207ENST00000376497 TUBG2Q9NRH3 451 aa12.89□□□□□ -0.35
CLCN6-207ENST00000376497 TBCCD1Q9NVR7 557 aa12.89□□□□□ -0.35
CLCN6-207ENST00000376497 CD300AQ9UGN4 299 aa12.89□□□□□ -0.35
CLCN6-207ENST00000376497 TEX13CA0A0J9YWL9 993 aa12.88□□□□□ -0.35
CLCN6-207ENST00000376497 HTR3EA5X5Y0 456 aa12.88□□□□□ -0.35
CLCN6-207ENST00000376497 DNAJC9-AS1A6NH13 148 aa12.88□□□□□ -0.35
CLCN6-207ENST00000376497 F5H0A9 414 aaPredicted RBP12.88□□□□□ -0.35
CLCN6-207ENST00000376497 TIMM8AO60220 97 aaPredicted RBP12.88□□□□□ -0.35
CLCN6-207ENST00000376497 PTP4A3O75365 173 aa12.88□□□□□ -0.35
CLCN6-207ENST00000376497 GPANK1O95872 356 aa12.88□□□□□ -0.35
CLCN6-207ENST00000376497 COX5BP10606 129 aa12.88□□□□□ -0.35
CLCN6-207ENST00000376497 TNFRSF1AP19438 455 aa12.88□□□□□ -0.35
CLCN6-207ENST00000376497 IFNA8P32881 189 aa12.88□□□□□ -0.35
CLCN6-207ENST00000376497 RPL4P36578 427 aaKnown RBP12.88□□□□□ -0.35
CLCN6-207ENST00000376497 GUCA1AP43080 201 aaPredicted RBP12.88□□□□□ -0.35
CLCN6-207ENST00000376497 SEC61A1P61619 476 aaKnown RBP12.88□□□□□ -0.35
CLCN6-207ENST00000376497 ZBED5Q49AG3 693 aa12.88□□□□□ -0.35
CLCN6-207ENST00000376497 ZNF774Q6NX45 483 aa12.88□□□□□ -0.35
CLCN6-207ENST00000376497 ARL9Q6T311 187 aa12.88□□□□□ -0.35
CLCN6-207ENST00000376497 RNF113BQ8IZP6 322 aaKnown RBP12.88□□□□□ -0.35
CLCN6-207ENST00000376497 BCL6BQ8N143 479 aaPredicted RBP12.88□□□□□ -0.35
CLCN6-207ENST00000376497 ZNF48Q96MX3 618 aaPredicted RBP12.88□□□□□ -0.35
CLCN6-207ENST00000376497 SIGLEC11Q96RL6 698 aa12.88□□□□□ -0.35
CLCN6-207ENST00000376497 CDRT15Q96T59 188 aa12.88□□□□□ -0.35
CLCN6-207ENST00000376497 MRI1Q9BV20 369 aa12.88□□□□□ -0.35
CLCN6-207ENST00000376497 C1QTNF5Q9BXJ0 243 aa12.88□□□□□ -0.35
CLCN6-207ENST00000376497 RPS6KA6Q9UK32 745 aa12.88□□□□□ -0.35
CLCN6-207ENST00000376497 NDRG4Q9ULP0 352 aaKnown RBP12.88□□□□□ -0.35
CLCN6-207ENST00000376497 SIGLEC7Q9Y286 467 aa12.88□□□□□ -0.35
CLCN6-207ENST00000376497 ARL2BPQ9Y2Y0 163 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms