RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 C14orf28Q4W4Y0 310 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 ATPAF1Q5TC12 328 aaPredicted RBP13.03□□□□□ -0.32
MSH5-201ENST00000375703 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.03□□□□□ -0.32
MSH5-201ENST00000375703 ESX1Q8N693 406 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 TSTD1Q8NFU3 115 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 SLC26A10Q8NG04 563 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 NKD1Q969G9 470 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 VN1R1Q9GZP7 353 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 SHARPINQ9H0F6 387 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 MYOZ1Q9NP98 299 aaPredicted RBP13.03□□□□□ -0.32
MSH5-201ENST00000375703 CENPMQ9NSP4 180 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 FBXO4Q9UKT5 387 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 PCDH15Q96QU1 1955 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 C2orf72A6NCS6 295 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 A6NIZ1 184 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 FTCDNL1E5RQL4 147 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 CDK2AP1O14519 115 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 CSN2P05814 226 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 CD27P26842 260 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 RAP1BP61224 184 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 RAP1AP62834 184 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 C1orf100Q5SVJ3 147 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 TMEM244Q5VVB8 128 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 TMEM81Q6P7N7 255 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 C5orf46Q6UWT4 87 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 SYT13Q7L8C5 426 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 OVCH2Q7RTZ1 564 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 SMRP1Q8NCR6 262 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 OR1J2Q8NGS2 313 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 OR1S1Q8NH92 325 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 EDAQ92838 391 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 SLC6A7Q99884 636 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 KLK13Q9UKR3 277 aa13.02□□□□□ -0.32
MSH5-201ENST00000375703 OR6C76A6NM76 312 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 NPIPA5E9PKD4 350 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 P2RY10O00398 339 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 BET1O15155 118 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 CD74P04233 296 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 FGF2P09038 288 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 AGTR1P30556 359 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 OGFOD3Q6PK18 319 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 DNM1P34Q6PK57 102 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 CD163Q86VB7 1156 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 ZNF584Q8IVC4 421 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 ZNF441Q8N8Z8 693 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 ACBD4Q8NC06 268 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 BVESQ8NE79 360 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 OR4S1Q8NGB4 309 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 OR4D6Q8NGJ1 314 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 TMEM234Q8WY98 164 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 FOXRED1Q96CU9 486 aaPredicted RBP13.02□□□□□ -0.33
MSH5-201ENST00000375703 ZNF107Q9UII5 783 aaPredicted RBP13.02□□□□□ -0.33
MSH5-201ENST00000375703 NPIPA1Q9UND3 350 aa13.02□□□□□ -0.33
MSH5-201ENST00000375703 PCNX3Q9H6A9 2034 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 METTL21EPA6NDL7 271 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 OR5H14A6NHG9 310 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 LMO7DNF2Z398 122 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 NUDT21O43809 227 aaKnown RBP13.01□□□□□ -0.33
MSH5-201ENST00000375703 ZNF217O75362 1048 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 RLN2P04090 185 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 H2BFMP0C1H6 154 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 FOLR1P15328 257 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 FGL1Q08830 312 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 DHRS2Q13268 280 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 TDGQ13569 410 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 OR7A5Q15622 319 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 NKPD1Q17RQ9 610 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 LIN54Q6MZP7 749 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 C17orf107Q6ZR85 190 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 LANCL3Q6ZV70 420 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 ST7LQ8TDW4 575 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 ASB10Q8WXI3 467 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 PTX4Q96A99 478 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 NPAS1Q99742 590 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 EDEM2Q9BV94 578 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 GDF2Q9UK05 429 aaPredicted RBP13.01□□□□□ -0.33
MSH5-201ENST00000375703 LOC390937A0A1W2PQ73 354 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 DISC1C4P0D8 188 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 EIF1AYO14602 144 aaKnown RBP13.01□□□□□ -0.33
MSH5-201ENST00000375703 SMAD9O15198 467 aaKnown RBP13.01□□□□□ -0.33
MSH5-201ENST00000375703 ATF4P18848 351 aaPredicted RBP13.01□□□□□ -0.33
MSH5-201ENST00000375703 CD34P28906 385 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 PAPD4Q6PIY7 484 aaKnown RBP13.01□□□□□ -0.33
MSH5-201ENST00000375703 CORO6Q6QEF8 472 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 SHISA6Q6ZSJ9 500 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 OR13C8Q8NGS7 320 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 ZBTB8AQ96BR9 441 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 FGGYQ96C11 551 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 ARL5BQ96KC2 179 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 RAB22AQ9UL26 194 aa13.01□□□□□ -0.33
MSH5-201ENST00000375703 NOP16Q9Y3C1 178 aaKnown RBP13.01□□□□□ -0.33
MSH5-201ENST00000375703 A0A0D9SG52 128 aa13□□□□□ -0.33
MSH5-201ENST00000375703 LOC101059948A0A1B0GTJ6 334 aa13□□□□□ -0.33
MSH5-201ENST00000375703 METTL12A8MUP2 240 aa13□□□□□ -0.33
MSH5-201ENST00000375703 D6RAR5 112 aa13□□□□□ -0.33
MSH5-201ENST00000375703 HPP00738 406 aa13□□□□□ -0.33
MSH5-201ENST00000375703 CD8AP01732 235 aa13□□□□□ -0.33
MSH5-201ENST00000375703 MGMTP16455 207 aa13□□□□□ -0.33
MSH5-201ENST00000375703 HNRNPKP61978 463 aaKnown RBP eCLIP13□□□□□ -0.335e-7■■■□□ 16.1
MSH5-201ENST00000375703 CXADRP78310 365 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms