RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 ERVFC1-1P60608 527 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 CTBP1Q13363 440 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 ZNF658BQ4V348 819 aaPredicted RBP7.11□□□□□ -1.27
USP48-203ENST00000374732 NHLRC3Q5JS37 347 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 SOHLH1Q5JUK2 328 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 LY6G6FQ5SQ64 297 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 OR52B6Q8NGF0 335 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 HPDLQ96IR7 371 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 MRGPRX3Q96LB0 322 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 SIGLEC10Q96LC7 697 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 ARHGAP9Q9BRR9 750 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 KLRF1Q9NZS2 232 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 B3GALT1Q9Y5Z6 326 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 TBC1D3DA0A087WVF3 549 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 HSPB2A8KAH6 182 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 TBC1D3LB9A6J9 549 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 RAB27BO00194 218 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 TYMSP04818 313 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 GDF1P27539 372 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 ADORA2AP29274 412 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 IDH3AP50213 366 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 PPOXP50336 477 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 ATP1B3P54709 279 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 NR0B2Q15466 257 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 HSPB2Q16082 182 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 EMC4Q5J8M3 183 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 TCTEX1D4Q5JR98 221 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 TBC1D3CQ6IPX1 549 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 WDR74Q6RFH5 385 aaPredicted RBP7.11□□□□□ -1.27
USP48-203ENST00000374732 ZNF841Q6ZN19 808 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 TBC1D3Q8IZP1 549 aaPredicted RBP7.11□□□□□ -1.27
USP48-203ENST00000374732 ZNF567Q8N184 647 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 RGP1Q92546 391 aaPredicted RBP7.11□□□□□ -1.27
USP48-203ENST00000374732 DYRK2Q92630 601 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 MRPS31Q92665 395 aaKnown RBP7.11□□□□□ -1.27
USP48-203ENST00000374732 MRGPRX2Q96LB1 330 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 ABHD6Q9BV23 337 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 LAMP3Q9UQV4 416 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 NME7Q9Y5B8 376 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 ANKRD20A5PA0PJZ0 165 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 APOC4-APOC2K7ER74 178 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 FABP7O15540 132 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 FCN3O75636 299 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 APOC2P02655 101 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 ENGP17813 658 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 KITLGP21583 273 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 ETV6P41212 452 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 KIR2DL1P43626 348 aaPredicted RBP7.1□□□□□ -1.27
USP48-203ENST00000374732 GABRA4P48169 554 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 RAB25P57735 213 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 BTN3A2P78410 334 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 CRHR2Q13324 411 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 ZNF585BQ52M93 769 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 TMEM128Q5BJH2 165 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 TIMM23BQ5SRD1 257 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 CPTPQ5TA50 214 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 BLOC1S3Q6QNY0 202 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 FAM131AQ6UXB0 335 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 CDHR3Q6ZTQ4 885 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 SYT12Q8IV01 421 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 OR4S1Q8NGB4 309 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 OR52I2Q8NH67 350 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 MRAPQ8TCY5 172 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 SOCS4Q8WXH5 440 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 MRAP2Q96G30 205 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 ADGRG7Q96K78 797 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 BTN2A3PQ96KV6 586 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 MS4A4EQ96PG1 132 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 SLC39A8Q9C0K1 460 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 CTDSP1Q9GZU7 261 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 TMEM38BQ9NVV0 291 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 V9GYS6 101 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 IGHV2-70DA0A0C4DH43 119 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 SH2D7A6NKC9 451 aaPredicted RBP7.1□□□□□ -1.27
USP48-203ENST00000374732 M0R233 179 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 OR1F1O43749 312 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 WDR1O75083 606 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 RAB36O95755 333 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 RCC1P18754 421 aaPredicted RBP7.1□□□□□ -1.27
USP48-203ENST00000374732 OSTNP61366 133 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 EFNB1P98172 346 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 PAX2Q02962 417 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 HYAL1Q12794 435 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 ZNF77Q15935 545 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 PDZD11Q5EBL8 140 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 ARL13AQ5H913 290 aaPredicted RBP7.1□□□□□ -1.27
USP48-203ENST00000374732 FAM102AQ5T9C2 384 aaPredicted RBP7.1□□□□□ -1.27
USP48-203ENST00000374732 LIPKQ5VXJ0 399 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 ALKAL2Q6UX46 152 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 ZNF705AQ6ZN79 300 aaPredicted RBP7.1□□□□□ -1.27
USP48-203ENST00000374732 TPRG1Q6ZUI0 275 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 FAM214BQ7L5A3 538 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 ATP6V1C2Q8NEY4 427 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 OR2T4Q8NH00 348 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 FAM45AQ8TCE6 357 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 RAB8BQ92930 207 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 SLCO4A1Q96BD0 722 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 OR5B12Q96R08 314 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 UBQLN4Q9NRR5 601 aa7.1□□□□□ -1.27
USP48-203ENST00000374732 ERVK13-1Q9NX77 482 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms