RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 MRM2Q9UI43 246 aaKnown RBP11.64□□□□□ -0.55
PRPF4-201ENST00000374198 KLK13Q9UKR3 277 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 KCNIP3Q9Y2W7 256 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 PPP1R2P9O14990 202 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 DOK2O60496 412 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 AIFM1O95831 613 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 TSPAN15O95858 294 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 SOD3P08294 240 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 RNH1P13489 461 aaKnown RBP11.64□□□□□ -0.55
PRPF4-201ENST00000374198 PSMB5P28074 263 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 SNCAP37840 140 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 MAP3K8P41279 467 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 ARRB1P49407 418 aaPredicted RBP11.64□□□□□ -0.55
PRPF4-201ENST00000374198 EBPQ15125 230 aaKnown RBP11.64□□□□□ -0.55
PRPF4-201ENST00000374198 GUK1Q16774 197 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 ARHGAP11BQ3KRB8 267 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 RNASE10Q5GAN6 216 aaKnown RBP11.64□□□□□ -0.55
PRPF4-201ENST00000374198 NPEPL1Q8NDH3 523 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 OR7G2Q8NG99 324 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 OR5AR1Q8NGP9 310 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF563Q8TA94 476 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 GRHL3Q8TE85 626 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 ARSGQ96EG1 525 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 SLC22A12Q96S37 553 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 SCRT1Q9BWW7 348 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 EPHX3Q9H6B9 360 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 CES1P1Q9UKY3 287 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 TMED3Q9Y3Q3 217 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 PLXNA2O75051 1894 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 TBC1D3BA6NDS4 549 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 OR4C45A6NMZ5 311 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF587BE7ETH6 402 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 STMND1H3BQB6 276 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 ADAM10O14672 748 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 TAAR5O14804 337 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 ADAP1O75689 374 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 CSTBP04080 98 aaKnown RBP11.63□□□□□ -0.55
PRPF4-201ENST00000374198 TBC1D3HP0C7X1 549 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 CRABP1P29762 137 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 MESTQ5EB52 335 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 GFI1BQ5VTD9 330 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 TBC1D3GQ6DHY5 549 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 MFSD12Q6NUT3 480 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 TAF8Q7Z7C8 310 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF584Q8IVC4 421 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF676Q8N7Q3 588 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 GPR148Q8TDV2 347 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 RAB24Q969Q5 203 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 MCHR2Q969V1 340 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 SLC41A2Q96JW4 573 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 OR52A5Q9H2C5 316 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 C6orf106Q9H6K1 298 aaPredicted RBP11.63□□□□□ -0.55
PRPF4-201ENST00000374198 ZMAT3Q9HA38 289 aaKnown RBP11.63□□□□□ -0.55
PRPF4-201ENST00000374198 RXFP3Q9NSD7 469 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 HS3ST2Q9Y278 367 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 AMDHD2Q9Y303 409 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 NUMA1Q14980 2115 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 ELOA3CA0A087WX78 387 aaPredicted RBP11.63□□□□□ -0.55
PRPF4-201ENST00000374198 OR5H15A6NDH6 313 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 OR5H1A6NKK0 313 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 A8MWP6 167 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 STK17BO94768 372 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 NDUFB2O95178 105 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 GPANK1O95872 356 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 EOMESO95936 686 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 SNRPCP09234 159 aaKnown RBP11.63□□□□□ -0.55
PRPF4-201ENST00000374198 ADRB3P13945 408 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 GPM6BQ13491 265 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 C14orf28Q4W4Y0 310 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 PDZD11Q5EBL8 140 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 SLC48A1Q6P1K1 146 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 Q6ZNB5 142 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 COMMD1Q8N668 190 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 FIBINQ8TAL6 211 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 ZPLD1Q8TCW7 415 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 CD300LFQ8TDQ1 290 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 SDF2Q99470 211 aa11.63□□□□□ -0.55
PRPF4-201ENST00000374198 FAM171A2A8MVW0 826 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 HIST1H2BKO60814 126 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 AGR2O95994 175 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 STATHP02808 62 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 HIST1H2BJP06899 126 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 SFTPBP07988 381 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 NR2C1P13056 603 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 RAB4AP20338 218 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 HIST1H2BOP23527 126 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 HIST1H2BBP33778 126 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 HIST1H2BDP58876 126 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 HIST1H2BCP62807 126 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 TNFRSF9Q07011 255 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 TOMM34Q15785 309 aaPredicted RBP11.62□□□□□ -0.55
PRPF4-201ENST00000374198 HIST2H2BEQ16778 126 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.62□□□□□ -0.55
PRPF4-201ENST00000374198 TMEM268Q5VZI3 342 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 Q6ZVU0 165 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 FAM174AQ8TBP5 190 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 HIST1H2BHQ93079 126 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 NTNG2Q96CW9 530 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 NKX3-1Q99801 234 aaPredicted RBP11.62□□□□□ -0.55
PRPF4-201ENST00000374198 HIST1H2BNQ99877 126 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms