RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 TNFRSF12AQ9NP84 129 aa6.34□□□□□ -1.39
YIPF3-201ENST00000372417 MRPL39Q9NYK5 338 aaKnown RBP6.34□□□□□ -1.39
YIPF3-201ENST00000372417 TMEM216Q9P0N5 145 aa6.34□□□□□ -1.39
YIPF3-201ENST00000372417 RPS6KB2Q9UBS0 482 aa6.34□□□□□ -1.39
YIPF3-201ENST00000372417 IGKV1D-42A0A075B6H8 117 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 TRAV38-1A0A0B4J264 116 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 PLPP3O14495 311 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 IGHG1P01857 330 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 GYPAP02724 150 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 FRMD6-AS1P0C7T7 363 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 LINC00032P0C843 101 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 ADORA3P0DMS8 318 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 CHI3L1P36222 383 aaPredicted RBP6.33□□□□□ -1.4
YIPF3-201ENST00000372417 HOXA4Q00056 320 aaPredicted RBP6.33□□□□□ -1.4
YIPF3-201ENST00000372417 PGS1Q32NB8 556 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 CLEC12AQ5QGZ9 265 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 RNF220Q5VTB9 566 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 Q6ZS46 218 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 FRMD7Q6ZUT3 714 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 TMEM219Q86XT9 240 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 BOLLQ8N9W6 283 aaKnown RBP6.33□□□□□ -1.4
YIPF3-201ENST00000372417 OR8G5Q8NG78 346 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 PIFOQ8TCI5 191 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 FBXO25Q8TCJ0 367 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 PTP4A1Q93096 173 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 MCHR2Q969V1 340 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 ERGIC1Q969X5 290 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 EPYCQ99645 322 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 OR2H1Q9GZK4 316 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 DPH5Q9H2P9 285 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 MEAF6Q9HAF1 191 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 MARCOQ9UEW3 520 aaPredicted RBP6.33□□□□□ -1.4
YIPF3-201ENST00000372417 TCF19Q9Y242 345 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 ZNF443Q9Y2A4 671 aaPredicted RBP6.33□□□□□ -1.4
YIPF3-201ENST00000372417 ZNF256Q9Y2P7 627 aaPredicted RBP6.33□□□□□ -1.4
YIPF3-201ENST00000372417 FIS1Q9Y3D6 152 aa6.33□□□□□ -1.4
YIPF3-201ENST00000372417 WDR91A4D1P6 747 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 OOEPA6NGQ2 149 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 NKX6-3A6NJ46 265 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 OR6A2O95222 327 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 LY86O95711 162 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 LY6G6CO95867 125 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 NR2F1P10589 423 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 RAC2P15153 192 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 PRPS1L1P21108 318 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 CDAP32320 146 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 SERPINB9P50453 376 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 NAA20P61599 178 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 MRPS34P82930 218 aaKnown RBP6.32□□□□□ -1.4
YIPF3-201ENST00000372417 NPTX1Q15818 432 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 PDCD4Q53EL6 469 aaKnown RBP6.32□□□□□ -1.4
YIPF3-201ENST00000372417 C9orf66Q5T8R8 295 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 PRAMEF6Q5VXH4 476 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 OR4F3Q6IEY1 312 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 OR2T2Q6IF00 324 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 RNF165Q6ZSG1 346 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 PIGWQ7Z7B1 504 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 HOMEZQ8IX15 550 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 CLIP4Q8N3C7 705 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 FGFRL1Q8N441 504 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 C10orf53Q8N6V4 93 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 CLDN22Q8N7P3 220 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 CELF2-AS1Q8N7Q2 184 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 IL17DQ8TAD2 202 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 NABP1Q96AH0 204 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 AJUBAQ96IF1 538 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 TEX37Q96LM6 180 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 COG8Q96MW5 612 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 ZNF582Q96NG8 517 aaPredicted RBP6.32□□□□□ -1.4
YIPF3-201ENST00000372417 CCDC115Q96NT0 180 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 MOGAT1Q96PD6 335 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 ZNF347Q96SE7 839 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 ECSITQ9BQ95 431 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 TM2D3Q9BRN9 247 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 C1orf50Q9BV19 199 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 TUBB1Q9H4B7 451 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 UFSP2Q9NUQ7 469 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 RNF7Q9UBF6 113 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 PITPNC1Q9UKF7 332 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 STARD10Q9Y365 291 aa6.32□□□□□ -1.4
YIPF3-201ENST00000372417 SF3B6Q9Y3B4 125 aaKnown RBP6.32□□□□□ -1.4
YIPF3-201ENST00000372417 DYNC1H1Q14204 4646 aaKnown RBP6.31□□□□□ -1.4
YIPF3-201ENST00000372417 A6NDX4 124 aa6.31□□□□□ -1.4
YIPF3-201ENST00000372417 LRRN3E7EW58 273 aa6.31□□□□□ -1.4
YIPF3-201ENST00000372417 RNASET2O00584 256 aaKnown RBP6.31□□□□□ -1.4
YIPF3-201ENST00000372417 AZIN1O14977 448 aa6.31□□□□□ -1.4
YIPF3-201ENST00000372417 CPSF4O95639 269 aaKnown RBP6.31□□□□□ -1.4
YIPF3-201ENST00000372417 CHEK2O96017 543 aa6.31□□□□□ -1.4
YIPF3-201ENST00000372417 SERPINE1P05121 402 aa6.31□□□□□ -1.4
YIPF3-201ENST00000372417 ECHS1P30084 290 aa6.31□□□□□ -1.4
YIPF3-201ENST00000372417 MYCNOSP40205 109 aa6.31□□□□□ -1.4
YIPF3-201ENST00000372417 RAB25P57735 213 aa6.31□□□□□ -1.4
YIPF3-201ENST00000372417 BLCAPP62952 87 aa6.31□□□□□ -1.4
YIPF3-201ENST00000372417 HOXC5Q00444 222 aa6.31□□□□□ -1.4
YIPF3-201ENST00000372417 SGCAQ16586 387 aa6.31□□□□□ -1.4
YIPF3-201ENST00000372417 HIST3H3Q16695 136 aa6.31□□□□□ -1.4
YIPF3-201ENST00000372417 PLA1AQ53H76 456 aa6.31□□□□□ -1.4
YIPF3-201ENST00000372417 RABL3Q5HYI8 236 aa6.31□□□□□ -1.4
YIPF3-201ENST00000372417 ALG10BQ5I7T1 473 aa6.31□□□□□ -1.4
YIPF3-201ENST00000372417 CFAP157Q5JU67 520 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms