RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 DZANK1Q9NVP4 752 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 COMMD9Q9P000 198 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 GSKIPQ9P0R6 139 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 TBC1D29Q9UFV1 150 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 OBSL1O75147 1896 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 IGKV1D-42A0A075B6H8 117 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 A0A1W2PP55 124 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 H0YIG0 161 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 TGFBR3LH3BV60 316 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 LRP3O75074 770 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 ABHD16AO95870 558 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 DBIP07108 87 aaKnown RBP4.87□□□□□ -1.63
ATG4A-204ENST00000372246 RAB40ALP0C0E4 278 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 OR8U9P0C7N5 309 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 CISD3P0C7P0 127 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 FAM157CP0CG43 387 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 GNB3P16520 340 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 HRH1P35367 487 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 PLA2G5P39877 138 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 CD96P40200 585 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 MNDAP41218 407 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 EIF1AXP47813 144 aaKnown RBP4.87□□□□□ -1.63
ATG4A-204ENST00000372246 NPY4RP50391 375 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 MECP2P51608 486 aaKnown RBP4.87□□□□□ -1.63
ATG4A-204ENST00000372246 GPR143P51810 404 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 PSG6Q00889 435 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 SMCO1Q147U7 214 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 PEA15Q15121 130 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 IRF4Q15306 451 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 EIF2S3LQ2VIR3 472 aaKnown RBP4.87□□□□□ -1.63
ATG4A-204ENST00000372246 FHL5Q5TD97 284 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 OR2A2Q6IF42 318 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 DHRS11Q6UWP2 260 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 PARGQ86W56 976 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF227Q86WZ6 799 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 SLC35F3Q8IY50 421 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 ARMC10Q8N2F6 343 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 SYS1Q8N2H4 156 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 OR4D6Q8NGJ1 314 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 OR8U1Q8NH10 309 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 RAB40AQ8WXH6 277 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 MRPL38Q96DV4 380 aaKnown RBP4.87□□□□□ -1.63
ATG4A-204ENST00000372246 KTI12Q96EK9 354 aaPredicted RBP4.87□□□□□ -1.63
ATG4A-204ENST00000372246 LINC00615Q96LM1 132 aaPredicted RBP4.87□□□□□ -1.63
ATG4A-204ENST00000372246 SOX7Q9BT81 388 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 PIGMQ9H3S5 423 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 EPHX3Q9H6B9 360 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 ELOVL3Q9HB03 270 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 RHOFQ9HBH0 211 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 CYTL1Q9NRR1 136 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 HAO2Q9NYQ3 351 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 GPN3Q9UHW5 284 aaPredicted RBP4.87□□□□□ -1.63
ATG4A-204ENST00000372246 GPR34Q9UPC5 381 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 KCNK7Q9Y2U2 307 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 CBY1Q9Y3M2 126 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 CHTOPQ9Y3Y2 248 aaKnown RBP4.87□□□□□ -1.63
ATG4A-204ENST00000372246 DMRT1Q9Y5R6 373 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 FANCMQ8IYD8 2048 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 SPAG17Q6Q759 2223 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 A0A1B0GTI1 187 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 A0A1B0GV90 55 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 A0A1W2PP11 408 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 A0A1W2PPE2 198 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 CXorf65A6NEN9 183 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 DUXAA6NLW8 204 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF736B4DX44 427 aaPredicted RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF749O43361 778 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 BRINP1O60477 761 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 RDH16O75452 317 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 HTR3BO95264 441 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 CSF1P09603 554 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 CALCBP10092 127 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 NME1P15531 152 aaKnown RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 EPCAMP16422 314 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 ABOP16442 354 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 ABCD3P28288 659 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 DRD3P35462 400 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 RBM34P42696 430 aaKnown RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 BTG2P78543 158 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 DCDP81605 110 aaKnown RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 HGFACQ04756 655 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 AIMP2Q13155 320 aaKnown RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 SMAD4Q13485 552 aaKnown RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 TSC22D1Q15714 1073 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 CD226Q15762 336 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 TOMM34Q15785 309 aaPredicted RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 KLHL26Q53HC5 615 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 MESTQ5EB52 335 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF542PQ5EBM4 170 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 C1orf53Q5VUE5 145 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 RPL7L1Q6DKI1 246 aaKnown RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF585AQ6P3V2 769 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 C5orf46Q6UWT4 87 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 DRAM2Q6UX65 266 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 ACOT7LQ6ZUV0 252 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 ERN2Q76MJ5 926 aaKnown RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 FJX1Q86VR8 437 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 LINC00346Q8IVM7 164 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 SPAG16Q8N0X2 631 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 RCBTB1Q8NDN9 531 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms