RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 IDH2P48735 452 aaKnown RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 AP2S1P53680 142 aaPredicted RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 LOXL3P58215 753 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 ERVK-25P63136 954 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 DUSP2Q05923 314 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 TMEM176BQ3YBM2 270 aaPredicted RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 TMEM268Q5VZI3 342 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 COX15Q7KZN9 410 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 SLC16A14Q7RTX9 510 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 LINC00528Q8N1L1 170 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 GALNT16Q8N428 558 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 PLPP5Q8NEB5 264 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 SDR9C7Q8NEX9 313 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 OR2M7Q8NG81 312 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 GPR32P1Q8NGA4 272 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 OR4E2Q8NGC2 313 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 OR4D5Q8NGN0 318 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 OR13C5Q8NGS8 318 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 TFGQ92734 400 aaPredicted RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 YIPF6Q96EC8 236 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 OSBPL11Q9BXB4 747 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 SYT4Q9H2B2 425 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 DUSP21Q9H596 190 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 ISYNA1Q9NPH2 558 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 MYOTQ9UBF9 498 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 KLHDC2Q9Y2U9 406 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 LSM2Q9Y333 95 aaKnown RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 A0A0J9YVX5 310 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 NKX6-3A6NJ46 265 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 RFPL4AA6NLU0 287 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 RFPL4AL1F8VTS6 287 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 FFAR1O14842 300 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 HIST1H2ABP04908 130 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 HIST1H2ADP20671 130 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 HIST1H1TP22492 207 aaPredicted RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 IGFBP5P24593 272 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 DCKP27707 260 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 NBL1P41271 181 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 RFX3P48380 749 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 PDX1P52945 283 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 CEBPGP53567 150 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 ISL1P61371 349 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 SNRPGP62308 76 aaKnown RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 SELENOWP63302 87 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 PNRC1Q12796 327 aaPredicted RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 GUK1Q16774 197 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 ACSF3Q4G176 576 aaPredicted RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 PAQR6Q6TCH4 344 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 MEPCEQ7L2J0 689 aaKnown RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 HIST3H2AQ7L7L0 130 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 PIP4P1Q86T03 277 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 TMEM217Q8N7C4 229 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 OR52L2PQ8NGH6 319 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 OR4A16Q8NH70 328 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 RPLP0P6Q8NHW5 317 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 APH1BQ8WW43 257 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 HPS1Q92902 700 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 PYURFQ96I23 114 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 NOL4LQ96MY1 436 aaPredicted RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 AIF1LQ9BQI0 150 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 C20orf24Q9BUV8 137 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 ALG8Q9BVK2 526 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 PLEKHJ1Q9NW61 149 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 FBXL12Q9NXK8 326 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 COLEC10Q9Y6Z7 277 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 COL6A3P12111 3177 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 hCG_38984A0A1B0GV85 526 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 SAGE2PA6NJ88 616 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 A8MUA0 341 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 P2RX6O15547 441 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 CTSVO60911 334 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 SNAP29O95721 258 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 C1QCP02747 245 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 GP9P14770 177 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 TBXA2RP21731 343 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 AZGP1P25311 298 aaKnown RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 GDF5P43026 501 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 GSSP48637 474 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 PRKXP51817 358 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 RAB38P57729 211 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 MXRA7P84157 204 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 ZNHIT3Q15649 155 aaPredicted RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 TSC22D1Q15714 1073 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 NDUFA9Q16795 377 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 SPANXN4Q5MJ08 99 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 CYB5R2Q6BCY4 276 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 XAF1Q6GPH4 301 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 TMEM205Q6UW68 189 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 UQCC3Q6UW78 93 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 TMEM179BQ7Z7N9 219 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 CCDC71Q8IV32 467 aaPredicted RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 LINC00471Q8N535 108 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 RNF166Q96A37 237 aaPredicted RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 TMEM159Q96B96 161 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 DCUN1D1Q96GG9 259 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 SH3YL1Q96HL8 342 aaPredicted RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 OR5B2Q96R09 309 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 ELOVL1Q9BW60 279 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 C6orf106Q9H6K1 298 aaPredicted RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 SLA2Q9H6Q3 261 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms