RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 GPR171O14626 319 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 SIAH2O43255 324 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 RNF13O43567 381 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 SOX30O94993 753 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 UTS2O95399 124 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 SERPINA3P01011 423 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 SAGP10523 405 aaPredicted RBP13.22□□□□□ -0.29
LMO4-201ENST00000370542 CALCRP30988 508 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 GABRA3P34903 492 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 CD79BP40259 229 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 CTBP2P56545 445 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 FAM27E3Q08E93 113 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 TRAM2Q15035 370 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 POU4F3Q15319 338 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.22□□□□□ -0.29
LMO4-201ENST00000370542 LGALSLQ3ZCW2 172 aaPredicted RBP13.22□□□□□ -0.29
LMO4-201ENST00000370542 IDNKQ5T6J7 187 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 OR2G6Q5TZ20 316 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 VWA1Q6PCB0 445 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 ZCCHC12Q6PEW1 402 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 BHLHB9Q6PI77 547 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 KRT74Q7RTS7 529 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 ZER1Q7Z7L7 766 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 MARCH3Q86UD3 253 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 GGNQ86UU5 652 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 GLCCI1Q86VQ1 547 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 TIGD4Q8IY51 512 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 SPICQ8N5J4 248 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 CDRT4Q8N9R6 151 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 OR2T4Q8NH00 348 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 SLC7A13Q8TCU3 470 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 YIPF4Q9BSR8 244 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 PINK1Q9BXM7 581 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 CACNG6Q9BXT2 260 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 SAP130Q9H0E3 1048 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 TRIM36Q9NQ86 728 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 NUDT15Q9NV35 164 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 ELOVL5Q9NYP7 299 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 DEFB108AA8MXU0 73 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 ATP6V1G2-DDX39BF2Z307 99 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 SSNA1O43805 119 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 B3GALNT1O75752 331 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 GIPP09681 153 aaPredicted RBP13.21□□□□□ -0.29
LMO4-201ENST00000370542 ZNF17P17021 662 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 IL11P20809 199 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 TBXA2RP21731 343 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 CCKARP32238 428 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 KHKP50053 298 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 RAP2BP61225 183 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 OPCMLQ14982 345 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 GSG1Q2KHT4 349 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 SPDYE7PQ495Y7 208 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 ELFN2Q5R3F8 820 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 AADACL4Q5VUY2 407 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 RAET1LQ5VY80 246 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 ACSM5Q6NUN0 579 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 ZNF322Q6U7Q0 402 aaPredicted RBP13.21□□□□□ -0.29
LMO4-201ENST00000370542 CHMP1BQ7LBR1 199 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 HSD17B13Q7Z5P4 300 aaPredicted RBP13.21□□□□□ -0.29
LMO4-201ENST00000370542 CXorf67Q86X51 503 aaPredicted RBP13.21□□□□□ -0.29
LMO4-201ENST00000370542 OR6V1Q8N148 313 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 EIF4E3Q8N5X7 224 aaKnown RBP13.21□□□□□ -0.29
LMO4-201ENST00000370542 OR4C3Q8NH37 302 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 PIGXQ8TBF5 258 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 SLC9A6Q92581 669 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 PTP4A1Q93096 173 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 CIDECQ96AQ7 238 aaPredicted RBP13.21□□□□□ -0.29
LMO4-201ENST00000370542 MOAP1Q96BY2 351 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 SGTBQ96EQ0 304 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 ADGRG7Q96K78 797 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 WFIKKN1Q96NZ8 548 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 RBP7Q96R05 134 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 MRI1Q9BV20 369 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 SHARPINQ9H0F6 387 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 GPN1Q9HCN4 374 aaPredicted RBP13.21□□□□□ -0.29
LMO4-201ENST00000370542 BEX4Q9NWD9 120 aaPredicted RBP13.21□□□□□ -0.29
LMO4-201ENST00000370542 CYB5R1Q9UHQ9 305 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 BAIAP2Q9UQB8 552 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 ARID1AO14497 2285 aa13.21□□□□□ -0.29
LMO4-201ENST00000370542 MXRA5Q9NR99 2828 aa13.21□□□□□ -0.3
LMO4-201ENST00000370542 A0A087WZY1 265 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 A0A0G2JPF8 293 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 MFSD2BA6NFX1 497 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 HNRNPCL2B2RXH8 293 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 HNRNPCL3B7ZW38 293 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 HNRNPCL4P0DMR1 293 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 ZNF250P15622 560 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 CELP19835 753 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 RAB3AP20336 220 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 CRYGSP22914 178 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 MAPK3P27361 379 aaPredicted RBP13.2□□□□□ -0.3
LMO4-201ENST00000370542 LOXP28300 417 aaPredicted RBP13.2□□□□□ -0.3
LMO4-201ENST00000370542 BTCP35070 178 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 MANFP55145 182 aaKnown RBP13.2□□□□□ -0.3
LMO4-201ENST00000370542 MRPS10P82664 201 aaKnown RBP13.2□□□□□ -0.3
LMO4-201ENST00000370542 NHLRC3Q5JS37 347 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 TFAP2EQ6VUC0 442 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 P4HA3Q7Z4N8 544 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 C6orf120Q7Z4R8 191 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 GTPBP8Q8N3Z3 284 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms