RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 MRPL22Q9NWU5 206 aaKnown RBP11.91□□□□□ -0.5
SSR4-202ENST00000370085 GDF2Q9UK05 429 aaPredicted RBP11.91□□□□□ -0.5
SSR4-202ENST00000370085 LAMP3Q9UQV4 416 aa11.91□□□□□ -0.5
SSR4-202ENST00000370085 PLEKHA6Q9Y2H5 1048 aa11.91□□□□□ -0.5
SSR4-202ENST00000370085 GMPPBQ9Y5P6 360 aa11.91□□□□□ -0.5
SSR4-202ENST00000370085 LHFPL6Q9Y693 200 aa11.91□□□□□ -0.5
SSR4-202ENST00000370085 PMF1-BGLAPU3KQ54 211 aa11.91□□□□□ -0.5
SSR4-202ENST00000370085 ABHD16AO95870 558 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 LCKP06239 509 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 CCL2P13500 99 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 TUBG1P23258 451 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 GGT2P36268 569 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 POLR2IP36954 125 aaKnown RBP11.9□□□□□ -0.5
SSR4-202ENST00000370085 SERPINF1P36955 418 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 SLC15A1P46059 708 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 NUDT6P53370 316 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 UCP2P55851 309 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 SNRPD2P62316 118 aaKnown RBP11.9□□□□□ -0.5
SSR4-202ENST00000370085 HIST1H3AP68431 136 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 SLC34A1Q06495 639 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 MOGQ16653 247 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 HIST2H3PS2Q5TEC6 136 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 RGS7BPQ6MZT1 257 aaPredicted RBP11.9□□□□□ -0.5
SSR4-202ENST00000370085 CORO6Q6QEF8 472 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 HIST2H3AQ71DI3 136 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 LINC00346Q8IVM7 164 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 GALNT4Q8N4A0 578 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 ZNF454Q8N9F8 522 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 CCDC168Q8NDH2 2452 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 SPTSSAQ969W0 71 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 MBD6Q96DN6 1003 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 ZMYND19Q96E35 227 aaPredicted RBP11.9□□□□□ -0.5
SSR4-202ENST00000370085 TRMT61AQ96FX7 289 aaKnown RBP11.9□□□□□ -0.5
SSR4-202ENST00000370085 TEAD3Q99594 435 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 SLC29A1Q99808 456 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 ATF6BQ99941 703 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 APOL4Q9BPW4 351 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 HCAR1Q9BXC0 346 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 WDR76Q9H967 626 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 TUBG2Q9NRH3 451 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 GPR160Q9UJ42 338 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 TMEM14AQ9Y6G1 99 aa11.9□□□□□ -0.5
SSR4-202ENST00000370085 RAI1Q7Z5J4 1906 aaPredicted RBP11.9□□□□□ -0.51
SSR4-202ENST00000370085 TEX15Q9BXT5 2789 aa11.9□□□□□ -0.51
SSR4-202ENST00000370085 RTTNQ86VV8 2226 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 MAST4O15021 2626 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 LOC100130705A0A1B0GUX0 176 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 B9A039 149 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 J3QW42 95 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 CASQ2O14958 399 aaPredicted RBP11.89□□□□□ -0.51
SSR4-202ENST00000370085 SYNGR3O43761 229 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 SMPD2O60906 423 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 ATE1O95260 518 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 APOC1P02654 83 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 ERCC1P07992 297 aaPredicted RBP11.89□□□□□ -0.51
SSR4-202ENST00000370085 OR4A8P0C604 315 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 CD53P19397 219 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 PEX2P28328 305 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 TPTEP56180 551 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 NKX6-1P78426 367 aaPredicted RBP11.89□□□□□ -0.51
SSR4-202ENST00000370085 HGFACQ04756 655 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 POU4F2Q12837 409 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 TMED1Q13445 227 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 PCK2Q16822 640 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 CCDC92Q53HC0 331 aaPredicted RBP11.89□□□□□ -0.51
SSR4-202ENST00000370085 LINC01590Q5TEZ4 76 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 MEDAGQ5VYS4 303 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 TTC23Q5W5X9 447 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 LPCAT4Q643R3 524 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 TMEM154Q6P9G4 183 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 B3GLCTQ6Y288 498 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 MEPCEQ7L2J0 689 aaKnown RBP11.89□□□□□ -0.51
SSR4-202ENST00000370085 DCXRQ7Z4W1 244 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 DTX2Q86UW9 622 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 OR5L1Q8NGL2 311 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 NRGNQ92686 78 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 C4orf45Q96LM5 186 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 Q96MT0 163 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 CNN2Q99439 309 aaKnown RBP11.89□□□□□ -0.51
SSR4-202ENST00000370085 COPS4Q9BT78 406 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 LIME1Q9H400 295 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 PLK3Q9H4B4 646 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 MARCH7Q9H992 704 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 RNPEPL1Q9HAU8 725 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 WARS2Q9UGM6 360 aaKnown RBP11.89□□□□□ -0.51
SSR4-202ENST00000370085 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.89□□□□□ -0.51
SSR4-202ENST00000370085 GRIP1Q9Y3R0 1128 aa11.89□□□□□ -0.51
SSR4-202ENST00000370085 LOC100509620A0A075B734 347 aa11.88□□□□□ -0.51
SSR4-202ENST00000370085 ZNF878C9JN71 531 aa11.88□□□□□ -0.51
SSR4-202ENST00000370085 H3BSA7 217 aa11.88□□□□□ -0.51
SSR4-202ENST00000370085 MT-ND5P03915 603 aa11.88□□□□□ -0.51
SSR4-202ENST00000370085 LYNP07948 512 aa11.88□□□□□ -0.51
SSR4-202ENST00000370085 DANCRP0C864 163 aa11.88□□□□□ -0.51
SSR4-202ENST00000370085 FAM157BP0CG42 384 aa11.88□□□□□ -0.51
SSR4-202ENST00000370085 SLC2A5P22732 501 aa11.88□□□□□ -0.51
SSR4-202ENST00000370085 GCH1P30793 250 aa11.88□□□□□ -0.51
SSR4-202ENST00000370085 THBS4P35443 961 aa11.88□□□□□ -0.51
SSR4-202ENST00000370085 ATP6V1E1P36543 226 aa11.88□□□□□ -0.51
SSR4-202ENST00000370085 EVX1P49640 407 aa11.88□□□□□ -0.51
SSR4-202ENST00000370085 GRB2P62993 217 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms