RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 RPS19P39019 145 aaKnown RBP17.12■□□□□ 0.33
CHTOP-204ENST00000368694 ODF4Q2M2E3 257 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 ACSM3Q53FZ2 586 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 DEGS2Q6QHC5 323 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 CEACAM19Q7Z692 300 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 MED12LQ86YW9 2145 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 ZNF100Q8IYN0 542 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 FOXB1Q99853 325 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 COMMD4Q9H0A8 199 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 C12orf49Q9H741 205 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 SLC7A10Q9NS82 523 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 CLCF1Q9UBD9 225 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 UPB1Q9UBR1 384 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 ZNF281Q9Y2X9 895 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 OR14I1A6ND48 311 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 OR6C65A6NJZ3 312 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 ZNF878C9JN71 531 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 B4GALT1P15291 398 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 AGTR1P30556 359 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 CD300CQ08708 224 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 ENDOGQ14249 297 aaKnown RBP17.12■□□□□ 0.33
CHTOP-204ENST00000368694 ZNF544Q6NX49 715 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 UNQ6494/PRO21346Q6UXR6 183 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 NUFIP2Q7Z417 695 aaKnown RBP17.12■□□□□ 0.33
CHTOP-204ENST00000368694 UBE2J2Q8N2K1 259 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 ZNF676Q8N7Q3 588 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 OR10S1Q8NGN2 331 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 GPR137Q96N19 417 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 LINC00470Q9BZP3 86 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 SLIRPQ9GZT3 109 aaKnown RBP17.12■□□□□ 0.33
CHTOP-204ENST00000368694 TMEM38BQ9NVV0 291 aa17.12■□□□□ 0.33
CHTOP-204ENST00000368694 CCDC59Q9P031 241 aaKnown RBP17.12■□□□□ 0.33
CHTOP-204ENST00000368694 NCOA6Q14686 2063 aaPredicted RBP17.11■□□□□ 0.33
CHTOP-204ENST00000368694 FREM1Q5H8C1 2179 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 TAF4O00268 1085 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 CASKO14936 926 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 PLA2G5P39877 138 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 MFGE8Q08431 387 aaPredicted RBP17.11■□□□□ 0.33
CHTOP-204ENST00000368694 TAF13Q15543 124 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 WDR38Q5JTN6 314 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 FAM27D1Q5T7N8 215 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 KLHL24Q6TFL4 600 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 ADGRE4PQ86SQ3 457 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 PRSS35Q8N3Z0 413 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 C4orf45Q96LM5 186 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 SIAEQ9HAT2 523 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 EMC9Q9Y3B6 208 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 CACNA1GO43497 2377 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 SVILO95425 2214 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 BSNQ9UPA5 3926 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 TMEM212A6NML5 194 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 ZNF587BE7ETH6 402 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 PNPP00491 289 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 IL1AP01583 271 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 HSD11B1P28845 292 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 YIF1BQ5BJH7 314 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 ZNF585AQ6P3V2 769 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 CADM3Q8N126 398 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 GJC3Q8NFK1 279 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 MCFD2Q8NI22 146 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 ZCCHC14Q8WYQ9 949 aaKnown RBP17.11■□□□□ 0.33
CHTOP-204ENST00000368694 GMPPAQ96IJ6 420 aaPredicted RBP17.11■□□□□ 0.33
CHTOP-204ENST00000368694 OR14A2Q96R54 314 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 GP6Q9HCN6 339 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 R4GMQ9 66 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 PMF1-BGLAPU3KQ54 211 aa17.11■□□□□ 0.33
CHTOP-204ENST00000368694 SMIM30A4D0T7 59 aa17.1■□□□□ 0.33
CHTOP-204ENST00000368694 LOC110117498-PIK3R3F6TDL0 507 aa17.1■□□□□ 0.33
CHTOP-204ENST00000368694 SC5DO75845 299 aa17.1■□□□□ 0.33
CHTOP-204ENST00000368694 RPS11P62280 158 aaKnown RBP eCLIP17.1■□□□□ 0.33
CHTOP-204ENST00000368694 FAM27BQ5VT28 67 aa17.1■□□□□ 0.33
CHTOP-204ENST00000368694 FDX2Q6P4F2 183 aa17.1■□□□□ 0.33
CHTOP-204ENST00000368694 GCNT2Q8N0V5 402 aa17.1■□□□□ 0.33
CHTOP-204ENST00000368694 MFSD4AQ8N468 514 aa17.1■□□□□ 0.33
CHTOP-204ENST00000368694 BRD7Q9NPI1 651 aa17.1■□□□□ 0.33
CHTOP-204ENST00000368694 TMEM269A0A1B0GVZ9 245 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 OR4C45A6NMZ5 311 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 CLEC2LP0C7M8 214 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 KIR3DL2P43630 455 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 ZNF404Q494X3 552 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 ZMAT1Q5H9K5 638 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 C9orf135Q5VTT2 229 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 PPIL3Q9H2H8 161 aaKnown RBP17.09■□□□□ 0.33
CHTOP-204ENST00000368694 SLC22A13Q9Y226 551 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 GTF3C1Q12789 2109 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 A0A1W2PPK0 400 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 AHRRA9YTQ3 701 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 H3BSH0 61 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 MYL9P24844 172 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 RORCP51449 518 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 CCR9P51686 369 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 FAPQ12884 760 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 ACSF3Q4G176 576 aaPredicted RBP17.09■□□□□ 0.33
CHTOP-204ENST00000368694 PAMR1Q6UXH9 720 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 ZNF813Q6ZN06 617 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 RDH10Q8IZV5 341 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 SLC22A24Q8N4F4 322 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 RGP1Q92546 391 aaPredicted RBP17.09■□□□□ 0.33
CHTOP-204ENST00000368694 FBXO17Q96EF6 278 aa17.09■□□□□ 0.33
CHTOP-204ENST00000368694 C6orf62Q9GZU0 229 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms