RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 SLC36A2Q495M3 483 aa9.56□□□□□ -0.88
TPM3-212ENST00000368533 LINC00114Q6XXX2 140 aa9.56□□□□□ -0.88
TPM3-212ENST00000368533 JAZF1Q86VZ6 243 aa9.56□□□□□ -0.88
TPM3-212ENST00000368533 OR5L2Q8NGL0 311 aa9.56□□□□□ -0.88
TPM3-212ENST00000368533 INTS12Q96CB8 462 aaKnown RBP9.56□□□□□ -0.88
TPM3-212ENST00000368533 TAAR9Q96RI9 348 aa9.56□□□□□ -0.88
TPM3-212ENST00000368533 UBL7Q96S82 380 aaPredicted RBP9.56□□□□□ -0.88
TPM3-212ENST00000368533 NKX6-2Q9C056 277 aaPredicted RBP9.56□□□□□ -0.88
TPM3-212ENST00000368533 ARL6Q9H0F7 186 aa9.56□□□□□ -0.88
TPM3-212ENST00000368533 SLC26A1Q9H2B4 701 aa9.56□□□□□ -0.88
TPM3-212ENST00000368533 IKZF2Q9UKS7 526 aa9.56□□□□□ -0.88
TPM3-212ENST00000368533 ZNF407Q9C0G0 2248 aa9.56□□□□□ -0.88
TPM3-212ENST00000368533 DSPP15924 2871 aaKnown RBP9.55□□□□□ -0.88
TPM3-212ENST00000368533 SPTBN4Q9H254 2564 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 A0A0G2JMM0 328 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 LOC101059948A0A1B0GTJ6 334 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 A0A1W2PPB8 328 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 A0A1W2PRS3 328 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 KIR3DP1A8MWS1 328 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 SPP1P10451 314 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 EPXP11678 715 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 HLA-DOBP13765 273 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 KLK2P20151 261 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 SLC2A5P22732 501 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 VEGFCP49767 419 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 RPL18Q07020 188 aaKnown RBP9.55□□□□□ -0.88
TPM3-212ENST00000368533 CDK5R1Q15078 307 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 ZNF74Q16587 644 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 PABPC1L2AQ5JQF8 200 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 FAAP20Q6NZ36 180 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 PPP1R32Q7Z5V6 425 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 VASH2Q86V25 355 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 SLC25A28Q96A46 364 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 SMIM19Q96E16 107 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 COL25A1Q9BXS0 654 aaPredicted RBP9.55□□□□□ -0.88
TPM3-212ENST00000368533 SLC19A3Q9BZV2 496 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 MMP25Q9NPA2 562 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 MGAT4CQ9UBM8 478 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 ING1Q9UK53 422 aaPredicted RBP9.55□□□□□ -0.88
TPM3-212ENST00000368533 GTF2A1LQ9UNN4 478 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 FARSAQ9Y285 508 aaKnown RBP9.55□□□□□ -0.88
TPM3-212ENST00000368533 RP1L1Q8IWN7 2480 aaPredicted RBP9.55□□□□□ -0.88
TPM3-212ENST00000368533 PIEZO2Q9H5I5 2752 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 A0A0G2JK05 382 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 OR6C68A6NDL8 312 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 UCHL1P09936 223 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 DNASE1L1P49184 302 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 UBE2MP61081 183 aaKnown RBP9.55□□□□□ -0.88
TPM3-212ENST00000368533 PITPNAQ00169 270 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 FGL1Q08830 312 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 HLXQ14774 488 aaPredicted RBP9.55□□□□□ -0.88
TPM3-212ENST00000368533 OR7A5Q15622 319 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 ALG10Q5BKT4 473 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 PMM1Q92871 262 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 SPACA9Q96E40 222 aaPredicted RBP9.55□□□□□ -0.88
TPM3-212ENST00000368533 AUNIPQ9H7T9 357 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 P4HTMQ9NXG6 502 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 ST6GALNAC2Q9UJ37 374 aa9.55□□□□□ -0.88
TPM3-212ENST00000368533 PURGQ9UJV8 347 aaKnown RBP9.55□□□□□ -0.88
TPM3-212ENST00000368533 FXYD6-FXYD2A0A087WZ82 144 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 TVP23AA6NH52 213 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 ZNF879B4DU55 563 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 ADAM10O14672 748 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 OR8G3PP0DMU2 310 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 GAAP10253 952 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 SPI1P17947 270 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 RBM34P42696 430 aaKnown RBP9.54□□□□□ -0.88
TPM3-212ENST00000368533 RPS15P62841 145 aaKnown RBP9.54□□□□□ -0.88
TPM3-212ENST00000368533 S100A12P80511 92 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 TMEM164Q5U3C3 297 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 RPS19BP1Q86WX3 136 aaKnown RBP9.54□□□□□ -0.88
TPM3-212ENST00000368533 CDH26Q8IXH8 852 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 NUBPLQ8TB37 319 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 ELP5Q8TE02 316 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 MRPL48Q96GC5 212 aaKnown RBP9.54□□□□□ -0.88
TPM3-212ENST00000368533 ADAD1Q96M93 576 aaKnown RBP9.54□□□□□ -0.88
TPM3-212ENST00000368533 FXYD6Q9H0Q3 95 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 WDR54Q9H977 334 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 CHRNA9Q9UGM1 479 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 A0A1B0GVI7 797 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 B4E171 279 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 DCTN6O00399 190 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 ABCD4O14678 606 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 UBL3O95164 117 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 HIST1H2ABP04908 130 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 FTH1P19P0C7X4 201 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 RNF224P0DH78 156 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 CD53P19397 219 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 TSPAN7P41732 249 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 CDKN2AP42771 156 aaKnown RBP9.54□□□□□ -0.88
TPM3-212ENST00000368533 DIO1P49895 249 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 TMEM255AQ5JRV8 349 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 SLC25A25Q6KCM7 469 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 RPL22L1Q6P5R6 122 aaKnown RBP9.54□□□□□ -0.88
TPM3-212ENST00000368533 LINC00696Q6ZRV3 163 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 HIST3H2AQ7L7L0 130 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 PXKQ7Z7A4 578 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 POMGNT2Q8NAT1 580 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 BPIFCQ8NFQ6 507 aa9.54□□□□□ -0.88
TPM3-212ENST00000368533 HIST1H2ACQ93077 130 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms