RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 RAB35Q15286 201 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 TAF13Q15543 124 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 SMN1Q16637 294 aaKnown RBP12.04□□□□□ -0.48
TPM3-211ENST00000368531 TEX30Q5JUR7 227 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 LCE2DQ5TA82 110 aaPredicted RBP12.04□□□□□ -0.48
TPM3-211ENST00000368531 HIST2H3PS2Q5TEC6 136 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 KRT80Q6KB66 452 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 VHLLQ6RSH7 139 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 HIST2H3AQ71DI3 136 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 IL17RDQ8NFM7 739 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 OR1J2Q8NGS2 313 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 APH1BQ8WW43 257 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 RNFT2Q96EX2 444 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 C14orf79Q96F83 325 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 Q96MT0 163 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 AMELYQ99218 206 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 TBX5Q99593 518 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 ABHD6Q9BV23 337 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 ADGRL4Q9HBW9 690 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 KLHDC2Q9Y2U9 406 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 FAM221AA4D161 298 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 SHISA9B4DS77 424 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 PSMD9O00233 223 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 WBP4O75554 376 aaKnown RBP12.03□□□□□ -0.48
TPM3-211ENST00000368531 FAM157BP0CG42 384 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 ZNF35P13682 527 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 MTNR1AP48039 350 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 ISL1P61371 349 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 GALK2Q01415 458 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 HGFACQ04756 655 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 PCK2Q16822 640 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 SLC25A30Q5SVS4 291 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 CDC20BQ86Y33 519 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 SLC35F2Q8IXU6 374 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 OR4F15Q8NGB8 312 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 OR10S1Q8NGN2 331 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 OTOSQ8NHW6 89 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 AKAP1Q92667 903 aaKnown RBP eCLIP12.03□□□□□ -0.48
TPM3-211ENST00000368531 SLAMF6Q96DU3 332 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 POM121L2Q96KW2 1035 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 ATF6BQ99941 703 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 YIPF3Q9GZM5 350 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 HDHD2Q9H0R4 259 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 UBTD1Q9HAC8 227 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 PNRC2Q9NPJ4 139 aaKnown RBP12.03□□□□□ -0.48
TPM3-211ENST00000368531 LAMP5Q9UJQ1 280 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.03□□□□□ -0.48
TPM3-211ENST00000368531 GRIP1Q9Y3R0 1128 aa12.03□□□□□ -0.48
TPM3-211ENST00000368531 OR6C6A6NF89 314 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 SNTNA6NMZ2 147 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 F5H5K5 113 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 GOSR1O95249 250 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 LYNP07948 512 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 SBK2P0C263 348 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 COX5BP10606 129 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 HSPA13P48723 471 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 KRTAP10-9P60411 292 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 ZNF91Q05481 1191 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 CDK5R2Q13319 367 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 GGTLC2Q14390 218 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 USP51Q70EK9 711 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 THAP5Q7Z6K1 395 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 OR10H4Q8NGA5 316 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 LILRB1Q8NHL6 650 aaPredicted RBP12.02□□□□□ -0.49
TPM3-211ENST00000368531 ST7LQ8TDW4 575 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 TMEM204Q9BSN7 226 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 COPS4Q9BT78 406 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 HAO2Q9NYQ3 351 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 CISD1Q9NZ45 108 aaKnown RBP12.02□□□□□ -0.49
TPM3-211ENST00000368531 EIF3KQ9UBQ5 218 aaKnown RBP12.02□□□□□ -0.49
TPM3-211ENST00000368531 COPS3Q9UNS2 423 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 N6AMT1Q9Y5N5 214 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 CADP27708 2225 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 RTTNQ86VV8 2226 aa12.02□□□□□ -0.49
TPM3-211ENST00000368531 LRRK2Q5S007 2527 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 UTP20O75691 2785 aaKnown RBP12.01□□□□□ -0.49
TPM3-211ENST00000368531 E7EQL1 145 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 ZNF670-ZNF695F2Z2N8 137 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 MAGEB4O15481 346 aaPredicted RBP12.01□□□□□ -0.49
TPM3-211ENST00000368531 ABHD16AO95870 558 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 H2BFMP0C1H6 154 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 DBTP11182 482 aaKnown RBP12.01□□□□□ -0.49
TPM3-211ENST00000368531 ALOX5APP20292 161 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 PRKXP51817 358 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 POU4F2Q12837 409 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 SNTB2Q13425 540 aaKnown RBP12.01□□□□□ -0.49
TPM3-211ENST00000368531 TMED1Q13445 227 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 LRRN1Q6UXK5 716 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 NAA40Q86UY6 237 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 RFLNBQ8N5W9 214 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 ZNF454Q8N9F8 522 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 NRGNQ92686 78 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 C4orf45Q96LM5 186 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 CNBD2Q96M20 576 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 COQ7Q99807 217 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 SPEF1Q9Y4P9 236 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 HSPE1-MOB4S4R3N1 261 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 COL12A1Q99715 3063 aa12.01□□□□□ -0.49
TPM3-211ENST00000368531 SPTAN1Q13813 2472 aaKnown RBP12□□□□□ -0.49
TPM3-211ENST00000368531 USP9YO00507 2555 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms