RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 SLCO4A1Q96BD0 722 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 ARL5BQ96KC2 179 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 PRRC1Q96M27 445 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 CMTM3Q96MX0 182 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 ZNF570Q96NI8 536 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 ZNF300Q96RE9 604 aaPredicted RBP6.79□□□□□ -1.32
YBX3-204ENST00000366290 ZNF426Q9BUY5 554 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 C1QTNF5Q9BXJ0 243 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 OR11A1Q9GZK7 315 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 C12orf10Q9HB07 376 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 IL1RAPQ9NPH3 570 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 CHRNA9Q9UGM1 479 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 TMED7Q9Y3B3 224 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 ENPP4Q9Y6X5 453 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 NAV3Q8IVL0 2385 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 FLNAP21333 2647 aaKnown RBP6.78□□□□□ -1.32
YBX3-204ENST00000366290 A0A087WUJ7 227 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 RPS10-NUDT3A0A1W2PQS6 291 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 TRAPPC13A5PLN9 417 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 hCG_2039718K7EN88 272 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 ZNF208O43345 1280 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 CHP2O43745 196 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 GMNNO75496 209 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 DIRAS1O95057 198 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 NDUFB4O95168 129 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 OR5F1O95221 314 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 SYNGR4O95473 234 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 IFNW1P05000 195 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 UQCRBP14927 111 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 NQO1P15559 274 aaKnown RBP6.78□□□□□ -1.32
YBX3-204ENST00000366290 CCNA2P20248 432 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 PTNP21246 168 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 AGTR1P30556 359 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 CCKARP32238 428 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 SFTPDP35247 375 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 UGT2B10P36537 528 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 COPZ1P61923 177 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 SNTB1Q13884 538 aaKnown RBP6.78□□□□□ -1.32
YBX3-204ENST00000366290 PDK3Q15120 406 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 SYT14P1Q58G82 188 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 ULK3Q6PHR2 472 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 FCRLAQ7L513 359 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 LINGO2Q7L985 606 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 PIWIL3Q7Z3Z3 882 aaKnown RBP6.78□□□□□ -1.32
YBX3-204ENST00000366290 HAPLN4Q86UW8 402 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 NKAIN4Q8IVV8 208 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 OFCC1Q8IZS5 231 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 SLC43A2Q8N370 569 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 CNEP1R1Q8N9A8 125 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 ATP6V1C2Q8NEY4 427 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 CANT1Q8WVQ1 401 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 DNAJA4Q8WW22 397 aaPredicted RBP6.78□□□□□ -1.32
YBX3-204ENST00000366290 DNAJA3Q96EY1 480 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 SLC47A1Q96FL8 570 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 SLC41A3Q96GZ6 507 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 RSRC1Q96IZ7 334 aaKnown RBP6.78□□□□□ -1.32
YBX3-204ENST00000366290 SEPHS2Q99611 448 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 SRXN1Q9BYN0 137 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 POLR2J2Q9GZM3 115 aaKnown RBP6.78□□□□□ -1.32
YBX3-204ENST00000366290 POLR2J3Q9H1A7 115 aaKnown RBP6.78□□□□□ -1.32
YBX3-204ENST00000366290 OR10A4Q9H209 315 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 MAGIXQ9H6Y5 334 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 TMEM27Q9HBJ8 222 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 RIMS3Q9UJD0 308 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 PROCRQ9UNN8 238 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 CEPT1Q9Y6K0 416 aa6.78□□□□□ -1.32
YBX3-204ENST00000366290 IGKV3D-15A0A087WSY6 115 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 DHRS12A0PJE2 317 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 ZNF724A8MTY0 619 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 ANKRD65E5RJM6 399 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 FTCDNL1E5RQL4 147 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 C16orf97H3BN30 126 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 SMAD9O15198 467 aaKnown RBP6.77□□□□□ -1.33
YBX3-204ENST00000366290 CYTIPO60759 359 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 MT-ND1P03886 318 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 LCATP04180 440 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 YES1P07947 543 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 THRBP10828 461 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 ZNF182P17025 639 aaPredicted RBP6.77□□□□□ -1.33
YBX3-204ENST00000366290 PSMB1P20618 241 aaKnown RBP6.77□□□□□ -1.33
YBX3-204ENST00000366290 NR4A2P43354 598 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 ZNF81P51508 661 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 UGT2B15P54855 530 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 TAS2R41P59536 307 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 H3F3AP84243 136 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 LTBQ06643 244 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 C6orf141Q5SZD1 244 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 C1orf146Q5VVC0 180 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 TMPPEQ6ZT21 453 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 SPATA24Q86W54 205 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 ZDHHC21Q8IVQ6 265 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 SCCPDHQ8NBX0 429 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 PAPD5Q8NDF8 572 aaKnown RBP6.77□□□□□ -1.33
YBX3-204ENST00000366290 LINC01560Q8TB33 94 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 ABHD3Q8WU67 409 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 DUS3LQ96G46 650 aaKnown RBP6.77□□□□□ -1.33
YBX3-204ENST00000366290 TMEM68Q96MH6 324 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 OR5B2Q96R09 309 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 FAM110AQ9BQ89 295 aa6.77□□□□□ -1.33
YBX3-204ENST00000366290 TMEM43Q9BTV4 400 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms