RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 PWWP2BQ6NUJ5 590 aa16.85■□□□□ 0.29
CLIP2-202ENST00000361545 SSX3Q99909 188 aa16.85■□□□□ 0.29
CLIP2-202ENST00000361545 CLEC1BQ9P126 229 aa16.85■□□□□ 0.29
CLIP2-202ENST00000361545 TNFSF14O43557 240 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 NFYAP23511 347 aaPredicted RBP16.84■□□□□ 0.29
CLIP2-202ENST00000361545 ZNF674Q2M3X9 581 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 C16orf47Q6ZP98 133 aaPredicted RBP16.84■□□□□ 0.29
CLIP2-202ENST00000361545 PRSS45Q7RTY3 260 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 COMMD7Q86VX2 200 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 OR4D9Q8NGE8 314 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 KIRREL1Q96J84 757 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 TMEM129A0AVI4 362 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 ZNF254O75437 659 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 ACSM1Q08AH1 577 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 DMRTC1Q5HYR2 192 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 SYT6Q5T7P8 510 aaPredicted RBP16.84■□□□□ 0.29
CLIP2-202ENST00000361545 SIAH3Q8IW03 269 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 RDH5Q92781 318 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 METTL17Q9H7H0 456 aaPredicted RBP16.84■□□□□ 0.29
CLIP2-202ENST00000361545 ZNF71Q9NQZ8 489 aaPredicted RBP16.84■□□□□ 0.29
CLIP2-202ENST00000361545 CHST2Q9Y4C5 530 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 ZAR1LA6NP61 321 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 ZNF891A8MT65 544 aaPredicted RBP16.84■□□□□ 0.29
CLIP2-202ENST00000361545 SIRPB1O00241 398 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 ALDH3B2P48448 385 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 NRTNQ99748 197 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.84■□□□□ 0.29
CLIP2-202ENST00000361545 FBXO4Q9UKT5 387 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 PATE3B3GLJ2 98 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 E9PI62 339 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 CDAP32320 146 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 AKR1C1Q04828 323 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 CEACAM16Q2WEN9 425 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 ACER2Q5QJU3 275 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 BORCS7Q96B45 105 aa16.84■□□□□ 0.29
CLIP2-202ENST00000361545 ZNF486Q96H40 463 aaPredicted RBP16.84■□□□□ 0.29
CLIP2-202ENST00000361545 FXYD1O00168 92 aa16.83■□□□□ 0.29
CLIP2-202ENST00000361545 PCSK6P29122 969 aa16.83■□□□□ 0.29
CLIP2-202ENST00000361545 SHBQ15464 509 aa16.83■□□□□ 0.29
CLIP2-202ENST00000361545 ALKBH6Q3KRA9 238 aa16.83■□□□□ 0.29
CLIP2-202ENST00000361545 ANKRD37Q7Z713 158 aa16.83■□□□□ 0.29
CLIP2-202ENST00000361545 C3orf49Q96BT1 292 aa16.83■□□□□ 0.29
CLIP2-202ENST00000361545 SUCNR1Q9BXA5 334 aa16.83■□□□□ 0.29
CLIP2-202ENST00000361545 FAM60AQ9NP50 221 aa16.83■□□□□ 0.29
CLIP2-202ENST00000361545 NECAP2Q9NVZ3 263 aa16.83■□□□□ 0.29
CLIP2-202ENST00000361545 CRYZL1O95825 349 aa16.83■□□□□ 0.29
CLIP2-202ENST00000361545 GLRA1P23415 457 aa16.83■□□□□ 0.29
CLIP2-202ENST00000361545 CTU2Q2VPK5 515 aaKnown RBP16.83■□□□□ 0.29
CLIP2-202ENST00000361545 CLVS2Q5SYC1 327 aa16.83■□□□□ 0.29
CLIP2-202ENST00000361545 DND1Q8IYX4 353 aaKnown RBP16.83■□□□□ 0.29
CLIP2-202ENST00000361545 PAQR8Q8TEZ7 354 aa16.83■□□□□ 0.29
CLIP2-202ENST00000361545 KTI12Q96EK9 354 aaPredicted RBP16.83■□□□□ 0.29
CLIP2-202ENST00000361545 REEP6Q96HR9 211 aa16.83■□□□□ 0.29
CLIP2-202ENST00000361545 OR2M2Q96R28 347 aa16.83■□□□□ 0.29
CLIP2-202ENST00000361545 SLC22A13Q9Y226 551 aa16.83■□□□□ 0.29
CLIP2-202ENST00000361545 K7EPK0 472 aa16.83■□□□□ 0.28
CLIP2-202ENST00000361545 HOXC4P09017 264 aaPredicted RBP16.83■□□□□ 0.28
CLIP2-202ENST00000361545 RAB6AP20340 208 aa16.83■□□□□ 0.28
CLIP2-202ENST00000361545 ZNF628Q5EBL2 1059 aa16.83■□□□□ 0.28
CLIP2-202ENST00000361545 FAM71E2Q8N5Q1 922 aa16.83■□□□□ 0.28
CLIP2-202ENST00000361545 RPH3ALQ9UNE2 315 aa16.83■□□□□ 0.28
CLIP2-202ENST00000361545 NRASP01111 189 aa16.83■□□□□ 0.28
CLIP2-202ENST00000361545 RPS19P39019 145 aaKnown RBP16.83■□□□□ 0.28
CLIP2-202ENST00000361545 SUMO3P55854 103 aaPredicted RBP16.83■□□□□ 0.28
CLIP2-202ENST00000361545 RAE1P78406 368 aaKnown RBP16.83■□□□□ 0.28
CLIP2-202ENST00000361545 LAIR1Q6GTX8 287 aa16.83■□□□□ 0.28
CLIP2-202ENST00000361545 OR4C3Q8NH37 302 aa16.83■□□□□ 0.28
CLIP2-202ENST00000361545 AKR7LQ8NHP1 331 aa16.83■□□□□ 0.28
CLIP2-202ENST00000361545 CPNE4Q96A23 557 aaPredicted RBP16.83■□□□□ 0.28
CLIP2-202ENST00000361545 COX14Q96I36 57 aa16.83■□□□□ 0.28
CLIP2-202ENST00000361545 KCNJ15Q99712 375 aa16.83■□□□□ 0.28
CLIP2-202ENST00000361545 SLC6A13Q9NSD5 602 aa16.83■□□□□ 0.28
CLIP2-202ENST00000361545 POLDIP2Q9Y2S7 368 aa16.83■□□□□ 0.28
CLIP2-202ENST00000361545 CACNA1CQ13936 2221 aa16.83■□□□□ 0.28
CLIP2-202ENST00000361545 SPATA46Q5T0L3 261 aa16.83■□□□□ 0.28
CLIP2-202ENST00000361545 OR51A2Q8NGJ7 313 aa16.83■□□□□ 0.28
CLIP2-202ENST00000361545 GLTPQ9NZD2 209 aa16.83■□□□□ 0.28
CLIP2-202ENST00000361545 TCRBV5S2A0A599 114 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 TMEM179BQ7Z7N9 219 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 OR13C5Q8NGS8 318 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 RNF167Q9H6Y7 350 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 ZNF225Q9UK10 706 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 A0A087WUJ7 227 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 CCR6P51684 374 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 STEAP3Q658P3 488 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 WDR88Q6ZMY6 472 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 CCDC71Q8IV32 467 aaPredicted RBP16.82■□□□□ 0.28
CLIP2-202ENST00000361545 SUMF1Q8NBK3 374 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 OR51H1Q8NH63 302 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 CNIH1O95406 144 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 MEOX1P50221 254 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 OVCH1Q7RTY7 1134 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 OR10J5Q8NHC4 309 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 FBXL2Q9UKC9 423 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 SLCO1B1Q9Y6L6 691 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 COL4A1P02462 1669 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 POU2F2P09086 479 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 KHDC1LQ5JSQ8 128 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 ZNF529Q6P280 563 aa16.82■□□□□ 0.28
CLIP2-202ENST00000361545 GCNT2Q8N0V5 402 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms