RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 CELA3BP08861 270 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 SPARCP09486 303 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 SBK2P0C263 348 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 APEX1P27695 318 aaKnown RBP11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 RAD52P43351 418 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 RPS23P62266 143 aaKnown RBP11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 IL5RAQ01344 420 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 GALK2Q01415 458 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 MAD2L1BPQ15013 274 aaPredicted RBP11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 SNCBQ16143 134 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 ZNF672Q499Z4 452 aaPredicted RBP11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 ZNF774Q6NX45 483 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 SLC22A25Q6T423 547 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 LYPD4Q6UWN0 246 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 ZNF704Q6ZNC4 412 aaPredicted RBP11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 DCXRQ7Z4W1 244 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 BCDIN3DQ7Z5W3 292 aaKnown RBP11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 THAP5Q7Z6K1 395 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 CDC20BQ86Y33 519 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 EGFL6Q8IUX8 553 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 AKR7LQ8NHP1 331 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 ST7LQ8TDW4 575 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 RNF133Q8WVZ7 376 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 UBE2FQ969M7 185 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 MS4A3Q96HJ5 214 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 ATF6BQ99941 703 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 BCL2L14Q9BZR8 327 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 CDH20Q9HBT6 801 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 PNRC2Q9NPJ4 139 aaKnown RBP11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 MRPS18AQ9NVS2 196 aaKnown RBP11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 DNAJC27Q9NZQ0 273 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 EIF3KQ9UBQ5 218 aaKnown RBP11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 VSTM5A8MXK1 200 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 ZNF878C9JN71 531 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 SELENOFO60613 162 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 APOC1P02654 83 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 LYNP07948 512 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 OR2T7P0C7T2 308 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 ALOX5APP20292 161 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 NR4A1P22736 598 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 CALCRP30988 508 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 HTR5AP47898 357 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 RGS6P49758 472 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 GRB2P62993 217 aaKnown RBP11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 CSNK2BP67870 215 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 DBPQ10586 325 aaPredicted RBP11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 RAB40BQ12829 278 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 KRTAP27-1Q3LI81 207 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 CRYBG3Q68DQ2 2970 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 ZNF787Q6DD87 383 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 ZNF544Q6NX49 715 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 KCTD18Q6PI47 426 aaPredicted RBP11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 CORO6Q6QEF8 472 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 DEGS2Q6QHC5 323 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 CFAP77Q6ZQR2 320 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 MYPOPQ86VE0 399 aaPredicted RBP11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 LINC00346Q8IVM7 164 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 OR2T27Q8NH04 317 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 FBLIM1Q8WUP2 373 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 APH1BQ8WW43 257 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 MAP6Q96JE9 813 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 COG8Q96MW5 612 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 HS3ST6Q96QI5 342 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 ZNF184Q99676 751 aaPredicted RBP11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 ABHD6Q9BV23 337 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 ANKRD60Q9BZ19 345 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 NIPAL2Q9H841 368 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 ELOVL3Q9HB03 270 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 ADGRL4Q9HBW9 690 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 LAMP5Q9UJQ1 280 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 EDARQ9UNE0 448 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 CELSR2Q9HCU4 2923 aa11.97□□□□□ -0.49
NSMCE1-201ENST00000361439 CADP27708 2225 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 LOC100509620A0A075B734 347 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 IRGMA1A4Y4 181 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 C5orf49A4QMS7 147 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 HS3ST1O14792 307 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 WBP4O75554 376 aaKnown RBP11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 CLIC3O95833 236 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 GNAO1P09471 354 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 OTX1P32242 354 aaPredicted RBP11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 ATP6V1E1P36543 226 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 ACTC1P68032 377 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 ACTA1P68133 377 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 NKX6-1P78426 367 aaPredicted RBP11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 EIF2B1Q14232 305 aaKnown RBP11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 KLHL22Q53GT1 634 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 C6orf52Q5T4I8 152 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 B3GLCTQ6Y288 498 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 TMEM200AQ86VY9 491 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 OR51G2Q8NGK0 314 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 FBXW5Q969U6 566 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 SPTSSAQ969W0 71 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 SLAMF6Q96DU3 332 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 Q9H521 79 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 ZNF442Q9H7R0 627 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 PLEKHF2Q9H8W4 249 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 SP140LQ9H930 580 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 FAIMQ9NVQ4 179 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms