RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 TMEM200CA6NKL6 621 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 LILRB5O75023 590 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 RAB11AP62491 216 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 RAE1P78406 368 aaKnown RBP12.21□□□□□ -0.45
LDB3-202ENST00000361373 ACER2Q5QJU3 275 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 ELP2Q6IA86 826 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 FAM117AQ9C073 453 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 RIMS4Q9H426 269 aaPredicted RBP12.21□□□□□ -0.45
LDB3-202ENST00000361373 A0A0B4J2E0 115 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 TRGV8A0A0C4DH27 118 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 A0A1B0GX12 115 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 CD79BP40259 229 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 CDK5R1Q15078 307 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 ZNF74Q16587 644 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 MDGA2Q7Z553 956 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 NRARPQ7Z6K4 114 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 KISS1RQ969F8 398 aaPredicted RBP12.21□□□□□ -0.46
LDB3-202ENST00000361373 FCRL1Q96LA6 429 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 ZNF225Q9UK10 706 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 NRASP01111 189 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 TCRBP04435 133 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 DDOSTP39656 456 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 SNRPD2P62316 118 aaKnown RBP12.21□□□□□ -0.46
LDB3-202ENST00000361373 TPBGQ13641 420 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 VN1R4Q7Z5H5 301 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 OR51F2Q8NH61 342 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 SEH1LQ96EE3 360 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 ZNF486Q96H40 463 aaPredicted RBP12.21□□□□□ -0.46
LDB3-202ENST00000361373 SIGLEC11Q96RL6 698 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 GON7Q9BXV9 100 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 ZFP64Q9NPA5 681 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 CLEC1BQ9P126 229 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 FBXL4Q9UKA2 621 aa12.21□□□□□ -0.46
LDB3-202ENST00000361373 TNFSF11O14788 317 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 PTPN6P29350 595 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 GALNSP34059 522 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 PEA15Q15121 130 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 PCK2Q16822 640 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 LTC4SQ16873 150 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 ZNF766Q5HY98 468 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 ELFN2Q5R3F8 820 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 PRSS42Q7Z5A4 293 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 DRAXINQ8NBI3 349 aaPredicted RBP12.2□□□□□ -0.46
LDB3-202ENST00000361373 DEFB124Q8NES8 71 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 NUBPLQ8TB37 319 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 ZC3HAV1LQ96H79 300 aaKnown RBP12.2□□□□□ -0.46
LDB3-202ENST00000361373 ZNF649Q9BS31 505 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 GCM1Q9NP62 436 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 GPR84Q9NQS5 396 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 ASF1BQ9NVP2 202 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 ZNF391Q9UJN7 358 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 R4GN57 208 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 C5orf49A4QMS7 147 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 SULT1C2O00338 296 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 AQP6Q13520 282 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 PRICKLE4Q2TBC4 344 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 CTU2Q2VPK5 515 aaKnown RBP12.2□□□□□ -0.46
LDB3-202ENST00000361373 NOXO1Q8NFA2 376 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 MFRPQ9BY79 579 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 GPR173Q9NS66 373 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 GPATCH2Q9NW75 528 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 TAS2R4Q9NYW5 299 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 IL20Q9NYY1 176 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 AIPO00170 330 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 APOA2P02652 100 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 SLC25A1P53007 311 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 RNLSQ5VYX0 342 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 LACC1Q8IV20 430 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 CISD2Q8N5K1 135 aaKnown RBP12.2□□□□□ -0.46
LDB3-202ENST00000361373 BHLHE23Q8NDY6 225 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 FBXO4Q9UKT5 387 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 COL4A5P29400 1685 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 SCN4AP35499 1836 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 HSPB6O14558 160 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 ARPC3O15145 178 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 MOSPD3O75425 235 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 ZNF14P17017 642 aaPredicted RBP12.2□□□□□ -0.46
LDB3-202ENST00000361373 CD82P27701 267 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 SFRP5Q5T4F7 317 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 GFRALQ6UXV0 394 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 USP51Q70EK9 711 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 SIAH3Q8IW03 269 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 OR10J5Q8NHC4 309 aa12.2□□□□□ -0.46
LDB3-202ENST00000361373 ZNF436Q9C0F3 470 aaPredicted RBP12.2□□□□□ -0.46
LDB3-202ENST00000361373 EXOSC3Q9NQT5 275 aaKnown RBP12.2□□□□□ -0.46
LDB3-202ENST00000361373 CGGBP1Q9UFW8 167 aaPredicted RBP12.2□□□□□ -0.46
LDB3-202ENST00000361373 SLC2A10O95528 541 aa12.19□□□□□ -0.46
LDB3-202ENST00000361373 TBPP20226 339 aa12.19□□□□□ -0.46
LDB3-202ENST00000361373 RPS19P39019 145 aaKnown RBP12.19□□□□□ -0.46
LDB3-202ENST00000361373 RFX2P48378 723 aa12.19□□□□□ -0.46
LDB3-202ENST00000361373 ZNF136P52737 540 aa12.19□□□□□ -0.46
LDB3-202ENST00000361373 RAB5BP61020 215 aa12.19□□□□□ -0.46
LDB3-202ENST00000361373 SLC22A25Q6T423 547 aa12.19□□□□□ -0.46
LDB3-202ENST00000361373 WNT3P56703 355 aa12.19□□□□□ -0.46
LDB3-202ENST00000361373 APOBEC3DQ96AK3 386 aaPredicted RBP12.19□□□□□ -0.46
LDB3-202ENST00000361373 S100PBPQ96BU1 408 aa12.19□□□□□ -0.46
LDB3-202ENST00000361373 ZNF419Q96HQ0 510 aaPredicted RBP12.19□□□□□ -0.46
LDB3-202ENST00000361373 PPP1R14DQ9NXH3 145 aa12.19□□□□□ -0.46
LDB3-202ENST00000361373 GDF2Q9UK05 429 aaPredicted RBP12.19□□□□□ -0.46
LDB3-202ENST00000361373 MCM3APO60318 1980 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms