RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 AKAP1Q92667 903 aaKnown RBP eCLIP16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 CACNG6Q9BXT2 260 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 DIABLOQ9NR28 239 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 FAM206AQ9NX38 181 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 GDF2Q9UK05 429 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 RBMX2Q9Y388 322 aaKnown RBP16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 LOC100289279A0A1B0GTE1 492 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 ZNF878C9JN71 531 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 H0YC42 278 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 EIF1AYO14602 144 aaKnown RBP16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 QDPRP09417 244 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 CAPZA1P52907 286 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 CLDN17P56750 224 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 NHLH1Q02575 133 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 Q0VFX4 171 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 EIF3IQ13347 325 aaKnown RBP16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 TMEM164Q5U3C3 297 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 CARD17Q5XLA6 110 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 ANKRD16Q6P6B7 361 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 ELMOD2Q8IZ81 293 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 TCTE3Q8IZS6 198 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 OR52I2Q8NH67 350 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 KCNE4Q8WWG9 221 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 FAM3DQ96BQ1 224 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 ACTR6Q9GZN1 396 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 FAM86C1Q9NVL1 165 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 TAS2R4Q9NYW5 299 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 LHFPL6Q9Y693 200 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 R4GN57 208 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 CCDC187A0A096LP49 1063 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 A8MV72 311 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 G3V3Y1 287 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 RAMP1O60894 148 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 GIFP27352 417 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 POU3F4P49335 361 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 STPG1Q5TH74 334 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 ZNF468Q5VIY5 522 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 ASPHD2Q6ICH7 369 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 BTN2A1Q7KYR7 527 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 NKAIN3Q8N8D7 197 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 OR51D1Q8NGF3 324 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 OR6M1Q8NGM8 313 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 DEDD2Q8WXF8 326 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 PHF21AQ96BD5 680 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 FOXRED1Q96CU9 486 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 CDC6Q99741 560 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 FAM117AQ9C073 453 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 RANGRFQ9HD47 186 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 NUDT15Q9NV35 164 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 P4HTMQ9NXG6 502 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 ING3Q9NXR8 418 aa16.25■□□□□ 0.19
PDLIM7-203ENST00000359895 SDK2Q58EX2 2172 aa16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 C7orf66A4D0T2 115 aa16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 NPIPA2E9PIF3 369 aa16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 NPIPA3F8WFD2 350 aa16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 ITGA5P08648 1049 aa16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 HSD11B1P28845 292 aa16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 EIF1AXP47813 144 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 CSNK1A1P48729 337 aa16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 NKX2-5P52952 324 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 ACER2Q5QJU3 275 aa16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 DNM1P46Q6ZS02 220 aa16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 CREB3L2Q70SY1 520 aa16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 OR10S1Q8NGN2 331 aa16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 TMEM54Q969K7 222 aa16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 PNPLA2Q96AD5 504 aa16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 INTS12Q96CB8 462 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 GPR87Q9BY21 358 aa16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 PBOV1Q9GZY1 135 aa16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 EMC7Q9NPA0 242 aa16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 GLTPQ9NZD2 209 aa16.24■□□□□ 0.19
PDLIM7-203ENST00000359895 C21orf140B9A014 251 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 C9orf172C9J069 976 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 MASP2O00187 686 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 P2RY10O00398 339 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 CDX4O14627 284 aaPredicted RBP16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 MT-ND4P03905 459 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 ACSM4P0C7M7 580 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 HTR2CP28335 458 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 GUCA1AP43080 201 aaPredicted RBP16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 ZNF133P52736 654 aaPredicted RBP16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 PSMA6P60900 246 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 LSM6P62312 80 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 GABREP78334 506 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 CD83Q01151 205 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 TAF13Q15543 124 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 C2orf76Q3KRA6 126 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 ELFN2Q5R3F8 820 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 C10orf128Q5T292 105 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 JMJD6Q6NYC1 403 aaPredicted RBP16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 CFAP77Q6ZQR2 320 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 SCMH1Q96GD3 660 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 DMRTB1Q96MA1 342 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 IRF2BPLQ9H1B7 796 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 HRASLSQ9HDD0 168 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 ITGB1BP2Q9UKP3 347 aa16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 MRPS18CQ9Y3D5 142 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-203ENST00000359895 TRAV6A0A075B6T7 132 aa16.22■□□□□ 0.19
PDLIM7-203ENST00000359895 ANKRD20A5PA0PJZ0 165 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms