RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 MXD1Q05195 221 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 KLRB1Q12918 225 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 SGCAQ16586 387 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 SPANXN2Q5MJ10 180 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 DDI2Q5TDH0 399 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 HIST2H3PS2Q5TEC6 136 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 TMEM244Q5VVB8 128 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 Q6ZS92 163 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 HIST2H3AQ71DI3 136 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.92□□□□□ -0.5
CCDC197-201ENST00000359253 SARAFQ96BY9 339 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 ZNF845Q96IR2 970 aaPredicted RBP11.92□□□□□ -0.5
CCDC197-201ENST00000359253 FOXN4Q96NZ1 517 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 PDCD1LG2Q9BQ51 273 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 RBM24Q9BX46 236 aaKnown RBP11.92□□□□□ -0.5
CCDC197-201ENST00000359253 PRDM14Q9GZV8 571 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 DEFB127Q9H1M4 99 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 PLEKHB1Q9UF11 243 aaPredicted RBP11.92□□□□□ -0.5
CCDC197-201ENST00000359253 ING1Q9UK53 422 aaPredicted RBP11.92□□□□□ -0.5
CCDC197-201ENST00000359253 TP53TG5Q9Y2B4 290 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 LHFPL6Q9Y693 200 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 ATMQ13315 3056 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 TMEM269A0A1B0GVZ9 245 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 OR14I1A6ND48 311 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 LRRTM2O43300 516 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 SRSF10O75494 262 aaKnown RBP11.91□□□□□ -0.5
CCDC197-201ENST00000359253 CD2P06729 351 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 CST2P09228 141 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 OCM2P0CE71 109 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 SRMP19623 302 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 RAB3BP20337 219 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 ACHEP22303 614 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 PTBP1P26599 531 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCDC197-201ENST00000359253 RANBP1P43487 201 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 PPP3R1P63098 170 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 ECH1Q13011 328 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 TAF13Q15543 124 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 WDR38Q5JTN6 314 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 OR7E24Q6IFN5 339 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 METAP1DQ6UB28 335 aaPredicted RBP11.91□□□□□ -0.5
CCDC197-201ENST00000359253 ABHD12BQ7Z5M8 362 aaPredicted RBP11.91□□□□□ -0.5
CCDC197-201ENST00000359253 CCDC190Q86UF4 302 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 CCDC54Q8NEL0 328 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 BBC3Q96PG8 261 aaPredicted RBP11.91□□□□□ -0.5
CCDC197-201ENST00000359253 DERL3Q96Q80 235 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 DCLRE1CQ96SD1 692 aaKnown RBP11.91□□□□□ -0.5
CCDC197-201ENST00000359253 SLCO5A1Q9H2Y9 848 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 ZNF71Q9NQZ8 489 aaPredicted RBP11.91□□□□□ -0.5
CCDC197-201ENST00000359253 PLSCR2Q9NRY7 297 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 CENPMQ9NSP4 180 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 DDX28Q9NUL7 540 aaKnown RBP11.91□□□□□ -0.5
CCDC197-201ENST00000359253 OR52A1Q9UKL2 312 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 CMAHPQ9Y471 501 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 FAM208BQ5VWN6 2430 aa11.91□□□□□ -0.5
CCDC197-201ENST00000359253 NOTOA8MTQ0 251 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 FARS2O95363 451 aaKnown RBP11.9□□□□□ -0.5
CCDC197-201ENST00000359253 CRYABP02511 175 aaKnown RBP11.9□□□□□ -0.5
CCDC197-201ENST00000359253 ZNF12P17014 697 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 APEX1P27695 318 aaKnown RBP11.9□□□□□ -0.5
CCDC197-201ENST00000359253 HSD11B1P28845 292 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 SCRN3Q0VDG4 424 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 RNFT1Q5M7Z0 435 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 PHYHD1Q5SRE7 291 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 C16orf87Q6PH81 154 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 LINC00346Q8IVM7 164 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 PRSS35Q8N3Z0 413 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 MFSD4AQ8N468 514 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 IL17RDQ8NFM7 739 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 ABHD3Q8WU67 409 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 NABP1Q96AH0 204 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 CMTM3Q96MX0 182 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 OR14A2Q96R54 314 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 KCNS3Q9BQ31 491 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 SLC30A2Q9BRI3 323 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 ZNF416Q9BWM5 594 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 SP140LQ9H930 580 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 GPR35Q9HC97 309 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 TCF7L1Q9HCS4 588 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 EMC7Q9NPA0 242 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 TMEM38BQ9NVV0 291 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 ABRACLQ9P1F3 81 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 ASH2LQ9UBL3 628 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 HHLA2Q9UM44 414 aa11.9□□□□□ -0.5
CCDC197-201ENST00000359253 CHD6Q8TD26 2715 aa11.89□□□□□ -0.51
CCDC197-201ENST00000359253 FREM3P0C091 2139 aa11.89□□□□□ -0.51
CCDC197-201ENST00000359253 IGSF10Q6WRI0 2623 aa11.89□□□□□ -0.51
CCDC197-201ENST00000359253 TRBV5-7A0A0A0MS05 114 aa11.89□□□□□ -0.51
CCDC197-201ENST00000359253 SLC22A20A6NK97 555 aa11.89□□□□□ -0.51
CCDC197-201ENST00000359253 TTLL8A6PVC2 850 aa11.89□□□□□ -0.51
CCDC197-201ENST00000359253 B8ZZF3 427 aa11.89□□□□□ -0.51
CCDC197-201ENST00000359253 RGS5O15539 181 aa11.89□□□□□ -0.51
CCDC197-201ENST00000359253 SLC19A2O60779 497 aa11.89□□□□□ -0.51
CCDC197-201ENST00000359253 KRT33AO76009 404 aa11.89□□□□□ -0.51
CCDC197-201ENST00000359253 PNPP00491 289 aa11.89□□□□□ -0.51
CCDC197-201ENST00000359253 PDGFAP04085 211 aa11.89□□□□□ -0.51
CCDC197-201ENST00000359253 CLEC2LP0C7M8 214 aa11.89□□□□□ -0.51
CCDC197-201ENST00000359253 BMP4P12644 408 aa11.89□□□□□ -0.51
CCDC197-201ENST00000359253 CDAP32320 146 aa11.89□□□□□ -0.51
CCDC197-201ENST00000359253 TNFSF8P32971 234 aa11.89□□□□□ -0.51
CCDC197-201ENST00000359253 KIR3DL2P43630 455 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms