RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 SSX4O60224 188 aa13.26□□□□□ -0.29
SLC6A20-202ENST00000358525 ATF1P18846 271 aa13.26□□□□□ -0.29
SLC6A20-202ENST00000358525 TBXA2RP21731 343 aa13.26□□□□□ -0.29
SLC6A20-202ENST00000358525 OMGP23515 440 aa13.26□□□□□ -0.29
SLC6A20-202ENST00000358525 PXT1Q8NFP0 134 aa13.26□□□□□ -0.29
SLC6A20-202ENST00000358525 SEMA6DQ8NFY4 1073 aa13.26□□□□□ -0.29
SLC6A20-202ENST00000358525 GABRG3Q99928 467 aa13.26□□□□□ -0.29
SLC6A20-202ENST00000358525 SLC25A31Q9H0C2 315 aa13.26□□□□□ -0.29
SLC6A20-202ENST00000358525 ADGRL4Q9HBW9 690 aa13.26□□□□□ -0.29
SLC6A20-202ENST00000358525 ZNF587BE7ETH6 402 aa13.26□□□□□ -0.29
SLC6A20-202ENST00000358525 LALBAP00709 142 aa13.26□□□□□ -0.29
SLC6A20-202ENST00000358525 NME1P15531 152 aaKnown RBP13.26□□□□□ -0.29
SLC6A20-202ENST00000358525 NME2P22392 152 aa13.26□□□□□ -0.29
SLC6A20-202ENST00000358525 IAH1Q2TAA2 248 aaPredicted RBP13.26□□□□□ -0.29
SLC6A20-202ENST00000358525 RBPMSQ93062 196 aaKnown RBP13.26□□□□□ -0.29
SLC6A20-202ENST00000358525 TCEAL3Q969E4 200 aa13.26□□□□□ -0.29
SLC6A20-202ENST00000358525 EDN3P14138 238 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 ZNF117Q03924 483 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 SMIM4Q8WVI0 70 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 NUDCD2Q8WVJ2 157 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 LIPHQ8WWY8 451 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 PELI1Q96FA3 418 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 CCDC74BQ96LY2 380 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 ABHD6Q9BV23 337 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 IGHV3-15A0A0B4J1V0 119 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 GUSBP08236 651 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 WDFY2Q96P53 400 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 PBOV1Q9GZY1 135 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 ZCCHC4Q9H5U6 513 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 FAM60AQ9NP50 221 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 OR1N1Q8NGS0 311 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 THOC3Q96J01 351 aaKnown RBP13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 LUZP4Q9P127 313 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 FAM166BA8MTA8 275 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 GREM1O60565 184 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 SNAPINO95295 136 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 GPANK1O95872 356 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 HOXC4P09017 264 aaPredicted RBP13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 GNB3P16520 340 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 M6PRP20645 277 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 MMP15P51511 669 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 CD300CQ08708 224 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 IL10RAQ13651 578 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 PHLDA2Q53GA4 152 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 B3GALT5Q9Y2C3 310 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 PTPRFP10586 1907 aa13.25□□□□□ -0.29
SLC6A20-202ENST00000358525 MYO16Q9Y6X6 1858 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 OR6C68A6NDL8 312 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 HSPB2A8KAH6 182 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 SHISA8B8ZZ34 492 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 PLPP2O43688 288 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 ALX3O95076 343 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 CBX7O95931 251 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 SNRNP70P08621 437 aaKnown RBP13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 GZMKP49863 264 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 PEA15Q15121 130 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 HSPB2Q16082 182 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 NMNAT2Q9BZQ4 307 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 TRAPPC2LQ9UL33 140 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 TMEM200CA6NKL6 621 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 KRBOX1C9JBD0 128 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 EML2O95834 649 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 FKBP2P26885 142 aaKnown RBP13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 ABCD3P28288 659 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 ERVK-16P61578 105 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 SRSF5Q13243 272 aaKnown RBP13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 TMEM71Q6P5X7 295 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 LANCL3Q6ZV70 420 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 KMT5CQ86Y97 462 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 C17orf47Q8NEP4 570 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 SCARB1Q8WTV0 552 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 S100PBPQ96BU1 408 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 PHF1O43189 567 aaPredicted RBP13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 ITGB2P05107 769 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 ALOX5APP20292 161 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 IL2RGP31785 369 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 ZNF133P52736 654 aaPredicted RBP13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 AADACL4Q5VUY2 407 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 MRM1Q6IN84 353 aaKnown RBP13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 SVBPQ8N300 66 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 PPP1R35Q8TAP8 253 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 MRGPRX4Q96LA9 322 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 OCSTAMPQ9BR26 566 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 C12orf49Q9H741 205 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 IMPA2O14732 288 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 AADACL3Q5VUY0 350 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 BHLHE23Q8NDY6 225 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 TWSG1Q9GZX9 223 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 MOB1AQ9H8S9 216 aa13.24□□□□□ -0.29
SLC6A20-202ENST00000358525 PTHLHP12272 177 aa13.23□□□□□ -0.29
SLC6A20-202ENST00000358525 SDHBP21912 280 aa13.23□□□□□ -0.29
SLC6A20-202ENST00000358525 CHATP28329 748 aa13.23□□□□□ -0.29
SLC6A20-202ENST00000358525 LSM11P83369 360 aaKnown RBP eCLIP13.23□□□□□ -0.29
SLC6A20-202ENST00000358525 ARF1P84077 181 aaKnown RBP13.23□□□□□ -0.29
SLC6A20-202ENST00000358525 DMRTC1Q5HYR2 192 aa13.23□□□□□ -0.29
SLC6A20-202ENST00000358525 MAMSTRQ6ZN01 415 aa13.23□□□□□ -0.29
SLC6A20-202ENST00000358525 SPEM1Q8N4L4 309 aa13.23□□□□□ -0.29
SLC6A20-202ENST00000358525 SUMF2Q8NBJ7 301 aa13.23□□□□□ -0.29
SLC6A20-202ENST00000358525 OR52B4Q8NGK2 314 aa13.23□□□□□ -0.29
SLC6A20-202ENST00000358525 OTOSQ8NHW6 89 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms