RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 AIMP2Q13155 320 aaKnown RBP8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 HERPUD1Q15011 391 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 UBE2V2Q15819 145 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 TCTN3Q6NUS6 607 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 ZNF343Q6P1L6 599 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 UBE3DQ7Z6J8 389 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 C17orf47Q8NEP4 570 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 BBS1Q8NFJ9 593 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 STEAP2Q8NFT2 490 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 CXorf40AQ8TE69 158 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 ABHD5Q8WTS1 349 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 APOBEC4Q8WW27 367 aaKnown RBP8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 JSRP1Q96MG2 331 aaPredicted RBP8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 EGLN3Q9H6Z9 239 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 SERINC1Q9NRX5 453 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 SHPKQ9UHJ6 478 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 CNTRLQ7Z7A1 2325 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 A0A087WZY1 265 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 TMEM269A0A1B0GVZ9 245 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 OR2C1O95371 312 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 CYB5R3P00387 301 aaPredicted RBP8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 IGHA1P01876 353 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 TRGC2P03986 189 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 C8GP07360 202 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 HKR1P10072 659 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 CEACAM1P13688 526 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 TPT1P13693 172 aaKnown RBP8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 COX7A2P14406 83 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 TBPP20226 339 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 MMP11P24347 488 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 MPLP40238 635 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 DVL1P1P54792 670 aaPredicted RBP8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 CDH11P55287 796 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 FOXK1P85037 733 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 MAPK14Q16539 360 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 VWA2Q5GFL6 755 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 PRAMEF14Q5SWL7 426 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 OR2T2Q6IF00 324 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 TEX38Q6PEX7 206 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 SIRT6Q8N6T7 355 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 ZNF283Q8N7M2 679 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 OR4C16Q8NGL9 310 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 BAHD1Q8TBE0 780 aaPredicted RBP8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 THAP3Q8WTV1 239 aaPredicted RBP8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 TPSD1Q9BZJ3 242 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 ZNF350Q9GZX5 532 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 RGCCQ9H4X1 137 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 CAPN10Q9HC96 672 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 USP36Q9P275 1121 aaKnown RBP8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 THAP10Q9P2Z0 257 aaPredicted RBP8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 TRPC4Q9UBN4 977 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 AK6Q9Y3D8 172 aaKnown RBP8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 PLXNA2O75051 1894 aa8.4□□□□□ -1.06
SMARCAL1-202ENST00000358207 IRGMA1A4Y4 181 aa8.4□□□□□ -1.07
SMARCAL1-202ENST00000358207 DVL1O14640 695 aa8.4□□□□□ -1.07
SMARCAL1-202ENST00000358207 SPARCP09486 303 aa8.4□□□□□ -1.07
SMARCAL1-202ENST00000358207 RNF151Q2KHN1 245 aa8.4□□□□□ -1.07
SMARCAL1-202ENST00000358207 BTNL8Q6UX41 500 aa8.4□□□□□ -1.07
SMARCAL1-202ENST00000358207 TMEM92Q6UXU6 159 aa8.4□□□□□ -1.07
SMARCAL1-202ENST00000358207 TEX19Q8NA77 164 aa8.4□□□□□ -1.07
SMARCAL1-202ENST00000358207 CADM4Q8NFZ8 388 aa8.4□□□□□ -1.07
SMARCAL1-202ENST00000358207 SMPDL3BQ92485 455 aa8.4□□□□□ -1.07
SMARCAL1-202ENST00000358207 EXTL1Q92935 676 aa8.4□□□□□ -1.07
SMARCAL1-202ENST00000358207 ZNF514Q96K75 400 aaPredicted RBP8.4□□□□□ -1.07
SMARCAL1-202ENST00000358207 MFRPQ9BY79 579 aa8.4□□□□□ -1.07
SMARCAL1-202ENST00000358207 POTEKPQ9BYX7 375 aa8.4□□□□□ -1.07
SMARCAL1-202ENST00000358207 ACTR3CQ9C0K3 210 aaPredicted RBP8.4□□□□□ -1.07
SMARCAL1-202ENST00000358207 ANKRD10Q9NXR5 420 aa8.4□□□□□ -1.07
SMARCAL1-202ENST00000358207 KCNK6Q9Y257 313 aa8.4□□□□□ -1.07
SMARCAL1-202ENST00000358207 FBXO7Q9Y3I1 522 aa8.4□□□□□ -1.07
SMARCAL1-202ENST00000358207 URB1O60287 2271 aaKnown RBP8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 CHD3Q12873 2000 aaKnown RBP8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 ASPMQ8IZT6 3477 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 FAM171A2A8MVW0 826 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 H7C417 338 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 TSPAN2O60636 221 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 REM1O75628 298 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 IGHEP01854 428 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR8U9P0C7N5 309 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 PGA3P0DJD8 388 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 ACP5P13686 325 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 DGKAP23743 735 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 CD82P27701 267 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 HTR2CP28335 458 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 BRS3P32247 399 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 PPP2CBP62714 309 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 PPP2CAP67775 309 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 SRSF5Q13243 272 aaKnown RBP8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 UBE2NLQ5JXB2 153 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 PIP5KL1Q5T9C9 394 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 NOXRED1Q6NXP6 359 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 NXPE4Q6UWF7 544 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 SZRD1Q7Z422 152 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 SLC35E3Q7Z769 313 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 LSRQ86X29 649 aaPredicted RBP8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 GID4Q8IVV7 300 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR4D11Q8NGI4 311 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR5M8Q8NGP6 311 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR8U1Q8NH10 309 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 METTL21AQ8WXB1 218 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms