RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 ADAM8P78325 824 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 SSBP1Q04837 148 aaKnown RBP12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 PUDPQ08623 228 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 FOXF1Q12946 379 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 IL11RAQ14626 422 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 TGIF1Q15583 401 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 OR7A5Q15622 319 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 ETFDHQ16134 617 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 MS4A18Q3C1V0 323 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 TEX30Q5JUR7 227 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 ANKRD16Q6P6B7 361 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 KCTD18Q6PI47 426 aaPredicted RBP12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 PPP1R3BQ86XI6 285 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 GLB1L2Q8IW92 636 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 ZNF248Q8NDW4 579 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 ZNF680Q8NEM1 530 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 ASB10Q8WXI3 467 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 MARVELD3Q96A59 401 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 SPSB2Q99619 263 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 CRB3Q9BUF7 120 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 ULBP3Q9BZM4 244 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 B3GNT4Q9C0J1 378 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 NKIRAS2Q9NYR9 191 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 MRPL15Q9P015 296 aaKnown RBP12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 KLK11Q9UBX7 282 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 TEX51A0A1B0GUA7 166 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 H7C417 338 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 ARPC1BO15143 372 aaKnown RBP12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 ZNF208O43345 1280 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 ICMTO60725 284 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 RBBP9O75884 186 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 IFNA7P01567 189 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 MAS1P04201 325 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 GIPP09681 153 aaPredicted RBP12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 EIF2B1Q14232 305 aaKnown RBP12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 ODF4Q2M2E3 257 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 ESCO2Q56NI9 601 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 TMEM255AQ5JRV8 349 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 LCN10Q6JVE6 187 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 TMEM205Q6UW68 189 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 ARSKQ6UWY0 536 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 NLRC3Q7RTR2 1065 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 KRT77Q7Z794 578 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 KDM8Q8N371 416 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 DNAAF1Q8NEP3 725 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 BEST4Q8NFU0 473 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 OR51A4Q8NGJ6 313 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 TSEN15Q8WW01 171 aaKnown RBP12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 DDIT4LQ96D03 193 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 ARL5BQ96KC2 179 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 OR10A4Q9H209 315 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 CLEC4MQ9H2X3 399 aaPredicted RBP12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 HEXA-AS1Q9H8Q6 139 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 KLRF1Q9NZS2 232 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 PPP4R1LQ9P1A2 415 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 MTFP1Q9UDX5 166 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 C19orf25Q9UFG5 118 aaPredicted RBP12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 VDAC3Q9Y277 283 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 COA3Q9Y2R0 106 aaPredicted RBP12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 HRH3Q9Y5N1 445 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 NPIPA5E9PKD4 350 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 STMND1H3BQB6 276 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 SLC17A2O00624 439 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 CREBL2O60519 120 aaPredicted RBP12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 TSC22D2O75157 780 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 ZFAND5O76080 213 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 STK17BO94768 372 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 MSX1P28360 303 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 DAP3P51398 398 aaKnown RBP12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 DHODHQ02127 395 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 CLN3Q13286 438 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 RAB11BQ15907 218 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 DNM1P34Q6PK57 102 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 LYPD8Q6UX82 237 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 H1FNTQ75WM6 255 aaPredicted RBP12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 OR2T35Q8NGX2 323 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 KCNE4Q8WWG9 221 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 MS4A3Q96HJ5 214 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 ZPBPQ9BS86 351 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 ABHD6Q9BV23 337 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 SPRY4Q9C004 299 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 SLC26A1Q9H2B4 701 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 CHST11Q9NPF2 352 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 NPIPA1Q9UND3 350 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 FLVCR2Q9UPI3 526 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 AUP1Q9Y679 476 aa12.76□□□□□ -0.37
NIPAL3-203ENST00000358028 PTPRQQ9UMZ3 2332 aa12.75□□□□□ -0.37
NIPAL3-203ENST00000358028 GGT3PA6NGU5 568 aa12.75□□□□□ -0.37
NIPAL3-203ENST00000358028 NPIPB13A6NJU9 1138 aa12.75□□□□□ -0.37
NIPAL3-203ENST00000358028 NPIPB4C9JG80 1138 aa12.75□□□□□ -0.37
NIPAL3-203ENST00000358028 H3BSH0 61 aa12.75□□□□□ -0.37
NIPAL3-203ENST00000358028 ETV2O00321 342 aaPredicted RBP12.75□□□□□ -0.37
NIPAL3-203ENST00000358028 LIPCP11150 499 aa12.75□□□□□ -0.37
NIPAL3-203ENST00000358028 FSTP19883 344 aa12.75□□□□□ -0.37
NIPAL3-203ENST00000358028 CD82P27701 267 aa12.75□□□□□ -0.37
NIPAL3-203ENST00000358028 PTGS2P35354 604 aa12.75□□□□□ -0.37
NIPAL3-203ENST00000358028 PTGDSP41222 190 aa12.75□□□□□ -0.37
NIPAL3-203ENST00000358028 RIDAP52758 137 aaKnown RBP12.75□□□□□ -0.37
NIPAL3-203ENST00000358028 RAP2BP61225 183 aa12.75□□□□□ -0.37
NIPAL3-203ENST00000358028 RPS15P62841 145 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms