RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 ZNF573Q86YE8 665 aa8.09□□□□□ -1.11
UPF2-202ENST00000357604 ZDHHC23Q8IYP9 409 aa8.09□□□□□ -1.11
UPF2-202ENST00000357604 ZNF101Q8IZC7 436 aa8.09□□□□□ -1.11
UPF2-202ENST00000357604 CMTM4Q8IZR5 234 aa8.09□□□□□ -1.11
UPF2-202ENST00000357604 JAGN1Q8N5M9 183 aa8.09□□□□□ -1.11
UPF2-202ENST00000357604 SLCO4A1Q96BD0 722 aa8.09□□□□□ -1.11
UPF2-202ENST00000357604 STARD4Q96DR4 205 aa8.09□□□□□ -1.11
UPF2-202ENST00000357604 DOK1Q99704 481 aa8.09□□□□□ -1.11
UPF2-202ENST00000357604 URM1Q9BTM9 101 aaKnown RBP8.09□□□□□ -1.11
UPF2-202ENST00000357604 SLC7A10Q9NS82 523 aa8.09□□□□□ -1.11
UPF2-202ENST00000357604 KCNIP1Q9NZI2 227 aa8.09□□□□□ -1.11
UPF2-202ENST00000357604 MALT1Q9UDY8 824 aa8.09□□□□□ -1.11
UPF2-202ENST00000357604 A0A1W2PR80 420 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 PTP4A3O75365 173 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 UPK3AO75631 287 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 PIPP12273 146 aaPredicted RBP8.08□□□□□ -1.12
UPF2-202ENST00000357604 SERPINF1P36955 418 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 CCDC58Q4VC31 144 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 TP53I3Q53FA7 332 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 HSD17B12Q53GQ0 312 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 DPY19L4Q7Z388 723 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 NINJ1Q92982 152 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 PLSCR2Q9NRY7 297 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 PIGLQ9Y2B2 252 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 IGKV1D-42A0A075B6H8 117 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 ZNF816-ZNF321PA0A0X1KG74 233 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 SLC16A6O15403 523 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 PRKYO43930 277 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 ZNF679Q8IYX0 411 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 AKR7LQ8NHP1 331 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 TEAD3Q99594 435 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 CENPOQ9BU64 300 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 PTDSS2Q9BVG9 487 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 PCM1Q15154 2024 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 K7EM74 188 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 TESK1Q15569 626 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 MEP1BQ16820 701 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 FAM169BQ8N8A8 192 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 PROK2Q9HC23 129 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 REV1Q9UBZ9 1251 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 A8MXE2 369 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 ZNF354AO60765 605 aaPredicted RBP8.08□□□□□ -1.12
UPF2-202ENST00000357604 HLA-HP01893 362 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 DBTP11182 482 aaKnown RBP8.08□□□□□ -1.12
UPF2-202ENST00000357604 DGUOKQ16854 277 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 C12orf73Q69YU5 71 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 RTL6Q6ICC9 239 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 ZNF774Q6NX45 483 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 OTOSQ8NHW6 89 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 ADGRG7Q96K78 797 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 NEDD4LQ96PU5 975 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 METTL9Q9H1A3 318 aa8.08□□□□□ -1.12
UPF2-202ENST00000357604 DIMT1Q9UNQ2 313 aaKnown RBP8.08□□□□□ -1.12
UPF2-202ENST00000357604 TMEM210A6NLX4 147 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 H3BNX3 289 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 ECDO95905 644 aaPredicted RBP8.07□□□□□ -1.12
UPF2-202ENST00000357604 RAF1P04049 648 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 IGHV1-2P23083 117 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 PCSK6P29122 969 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 WNT4P56705 351 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 ODF4Q2M2E3 257 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 SETD6Q8TBK2 473 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 RNF138Q8WVD3 245 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 BCL2L2Q92843 193 aaPredicted RBP8.07□□□□□ -1.12
UPF2-202ENST00000357604 KCTD7Q96MP8 289 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 DMRTA2Q96SC8 542 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 KCNK17Q96T54 332 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 TTTY10Q9BZA0 68 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 CLEC4MQ9H2X3 399 aaPredicted RBP8.07□□□□□ -1.12
UPF2-202ENST00000357604 MED20Q9H944 212 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 ACOT13Q9NPJ3 140 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 HINT3Q9NQE9 182 aaKnown RBP8.07□□□□□ -1.12
UPF2-202ENST00000357604 CBLN4Q9NTU7 201 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 SSUH2Q9Y2M2 353 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 UNC13CQ8NB66 2214 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 CLDN25C9JDP6 229 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 CD40P25942 277 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 ZNF81P51508 661 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 FAM27E3Q08E93 113 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 GABRA6Q16445 453 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 TSTQ16762 297 aaKnown RBP8.07□□□□□ -1.12
UPF2-202ENST00000357604 ARSJQ5FYB0 599 aaPredicted RBP8.07□□□□□ -1.12
UPF2-202ENST00000357604 USP51Q70EK9 711 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 SERPINA12Q8IW75 414 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 SYS1Q8N2H4 156 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 CNIH3Q8TBE1 160 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 C10orf35Q96D05 121 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 C4orf36Q96KX1 117 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 MUS81Q96NY9 551 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 MRI1Q9BV20 369 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 ZNF281Q9Y2X9 895 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 CRYGSP22914 178 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 APEX1P27695 318 aaKnown RBP8.07□□□□□ -1.12
UPF2-202ENST00000357604 POU3F4P49335 361 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 ALKBH1Q13686 389 aaKnown RBP8.07□□□□□ -1.12
UPF2-202ENST00000357604 TRAPPC6BQ86SZ2 158 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 Q8IYB0 196 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 SPICQ8N5J4 248 aa8.07□□□□□ -1.12
UPF2-202ENST00000357604 ADAT1Q9BUB4 502 aaKnown RBP8.07□□□□□ -1.12
UPF2-202ENST00000357604 CST11Q9H112 138 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms