RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 GCH1P30793 250 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 TMEM33P57088 247 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 PCBD1P61457 104 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 AQP6Q13520 282 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 KCNMB1Q16558 191 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 C1orf94Q6P1W5 598 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 LEG1Q6P5S2 330 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 LYPD4Q6UWN0 246 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 C1orf229Q6ZS94 237 aaPredicted RBP14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 GLB1L2Q8IW92 636 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 ALDH16A1Q8IZ83 802 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 OR4C15Q8NGM1 316 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 DDOQ99489 341 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 SRA1Q9HD15 236 aaKnown RBP14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 PLEK2Q9NYT0 353 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 B9D1Q9UPM9 204 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 LYVE1Q9Y5Y7 322 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 DCTN3O75935 186 aa14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 ABHD16AO95870 558 aa14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 DVL1P1P54792 670 aaPredicted RBP14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 SELENOVP59797 346 aa14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 SCRN3Q0VDG4 424 aa14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 HLXQ14774 488 aaPredicted RBP14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 KRT72Q14CN4 511 aa14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 ZNF362Q5T0B9 420 aaPredicted RBP14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 SLC35F1Q5T1Q4 408 aa14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 ZNF770Q6IQ21 691 aaPredicted RBP14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 C16orf89Q6UX73 402 aa14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 ZNF620Q6ZNG0 422 aa14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 CFAP77Q6ZQR2 320 aa14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 ADCK1Q86TW2 530 aa14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 LINC00346Q8IVM7 164 aa14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 SDR9C7Q8NEX9 313 aa14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 SLC26A10Q8NG04 563 aa14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 OR1F12Q8NHA8 337 aa14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 CLPTM1LQ96KA5 538 aa14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 SAP30LQ9HAJ7 183 aa14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 MRPL22Q9NWU5 206 aaKnown RBP14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 TMEFF2Q9UIK5 374 aaPredicted RBP14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 PURGQ9UJV8 347 aaKnown RBP14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 NDRG4Q9ULP0 352 aaKnown RBP14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 GRIP1Q9Y3R0 1128 aa14.17□□□□□ -0.14
PDLIM7-201ENST00000355572 C5orf63A6NC05 138 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 B2RBV5 119 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 ARPC3O15145 178 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 GMNNO75496 209 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 IFNA2P01563 188 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 ADH4P08319 380 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 ITGA2P17301 1181 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 MAGEA2P43356 314 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 RPS6KA3P51812 740 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 LSM6P62312 80 aaKnown RBP14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 MXRA7P84157 204 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 PCGF3Q3KNV8 242 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 NAA40Q86UY6 237 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 SPATA3Q8NHX4 192 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 CMBLQ96DG6 245 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 ZNF665Q9H7R5 613 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 PNRC2Q9NPJ4 139 aaKnown RBP14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 RPRD1BQ9NQG5 326 aaKnown RBP14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 TBCCD1Q9NVR7 557 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 PTTG3PQ9NZH4 202 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 ACTR3BQ9P1U1 418 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 WNK2Q9Y3S1 2297 aa14.16□□□□□ -0.14
PDLIM7-201ENST00000355572 BHLHE40O14503 412 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 TPD52L2O43399 206 aaKnown RBP14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 GASTP01350 101 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 IGHV2-5P01817 119 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 SLC6A6P31641 620 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 RPS27P42677 84 aaKnown RBP14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 GUCA1AP43080 201 aaPredicted RBP14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 CENPAP49450 140 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 TSPAN31Q12999 210 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 CDK5R2Q13319 367 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 MTX3Q5HYI7 312 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 CLEC12AQ5QGZ9 265 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 OR5AS1Q8N127 324 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 CYB561A3Q8NBI2 242 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 NPEPL1Q8NDH3 523 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 OR10S1Q8NGN2 331 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 GNPDA2Q8TDQ7 276 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 CCL17Q92583 94 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 TMEM186Q96B77 213 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 NSL1Q96IY1 281 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 IFT27Q9BW83 186 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 ELOVL3Q9HB03 270 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 G6PC2Q9NQR9 355 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 DECR2Q9NUI1 292 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 HIF1ANQ9NWT6 349 aa14.15□□□□□ -0.14
PDLIM7-201ENST00000355572 B4DSR2 109 aa14.14□□□□□ -0.15
PDLIM7-201ENST00000355572 H0YL77 283 aa14.14□□□□□ -0.15
PDLIM7-201ENST00000355572 TIMM8AO60220 97 aaPredicted RBP14.14□□□□□ -0.15
PDLIM7-201ENST00000355572 MSMBP08118 114 aa14.14□□□□□ -0.15
PDLIM7-201ENST00000355572 CD55P08174 381 aa14.14□□□□□ -0.15
PDLIM7-201ENST00000355572 KITLGP21583 273 aa14.14□□□□□ -0.15
PDLIM7-201ENST00000355572 PYCR1P32322 319 aa14.14□□□□□ -0.15
PDLIM7-201ENST00000355572 GGT2P36268 569 aa14.14□□□□□ -0.15
PDLIM7-201ENST00000355572 HMGA2P52926 109 aa14.14□□□□□ -0.15
PDLIM7-201ENST00000355572 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.14□□□□□ -0.15
PDLIM7-201ENST00000355572 COX10Q12887 443 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms