RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 CTXN2P0C2S0 81 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 LAP3P28838 519 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 PLXDC2Q6UX71 529 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 Q6ZRG5 221 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 C1orf87Q8N0U7 546 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 TXNL1O43396 289 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 DFFBO76075 338 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 ETV1P50549 477 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 FCN2Q15485 313 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 RDH5Q92781 318 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 EXOSC3Q9NQT5 275 aaKnown RBP16.42■□□□□ 0.22
COL18A1-202ENST00000355480 CMC2Q9NRP2 79 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 MED29Q9NX70 200 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 MEIKINA0A087WXM9 373 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 OR2A25A4D2G3 310 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 ABCD4O14678 606 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 TRAF3IP2O43734 574 aaPredicted RBP16.41■□□□□ 0.22
COL18A1-202ENST00000355480 CCL7P80098 99 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 FAM74A1Q5RGS3 127 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 TRILQ7L0X0 811 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 SLC35E1Q96K37 410 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 SEC22CQ9BRL7 303 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 OPA3Q9H6K4 179 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 IGLV3-25P01717 112 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 PSMB3P49720 205 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 OTUD1Q5VV17 481 aaPredicted RBP16.41■□□□□ 0.22
COL18A1-202ENST00000355480 LHFPL2Q6ZUX7 228 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 SSX9Q7RTT3 188 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 PPP1R3CQ9UQK1 317 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 SLC22A20A6NK97 555 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 SSTP61278 116 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 B3GALT5Q9Y2C3 310 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 HPNP05981 417 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 GPR12P47775 334 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 SYT6Q5T7P8 510 aaPredicted RBP16.41■□□□□ 0.22
COL18A1-202ENST00000355480 LAIR1Q6GTX8 287 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 Q6ZNB5 142 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 TMEM200AQ86VY9 491 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 ZCCHC4Q9H5U6 513 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 HINT3Q9NQE9 182 aaKnown RBP16.41■□□□□ 0.22
COL18A1-202ENST00000355480 TMEM30AQ9NV96 361 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 NRASP01111 189 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 IGFBP1P08833 259 aaPredicted RBP16.41■□□□□ 0.22
COL18A1-202ENST00000355480 SRP9P49458 86 aaKnown RBP16.41■□□□□ 0.22
COL18A1-202ENST00000355480 HLA-BQ31612 363 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 ASTLQ6HA08 431 aaPredicted RBP16.41■□□□□ 0.22
COL18A1-202ENST00000355480 TERB2Q8NHR7 220 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 MRGPRX4Q96LA9 322 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 RNF32Q9H0A6 362 aa16.41■□□□□ 0.22
COL18A1-202ENST00000355480 PATZ1Q9HBE1 687 aaKnown RBP16.41■□□□□ 0.22
COL18A1-202ENST00000355480 TMEM129A0AVI4 362 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 PCSK6P29122 969 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 SOHLH1Q5JUK2 328 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 ZNF573Q86YE8 665 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 C3orf49Q96BT1 292 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 MYEOVQ96EZ4 313 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 GPR84Q9NQS5 396 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 METTL12A8MUP2 240 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 PNLIPRP2P54317 469 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 ELLP55199 621 aaPredicted RBP16.4■□□□□ 0.22
COL18A1-202ENST00000355480 Q6ZS52 159 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 IER2Q9BTL4 223 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 ASB1Q9Y576 335 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 A0A087WV62 115 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 SIX6O95475 246 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 ALOX5APP20292 161 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 F2RP25116 425 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 BSGP35613 385 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 RAB5CP51148 216 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 REEP6Q96HR9 211 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 HMGN3Q15651 99 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 ACSM5Q6NUN0 579 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 TCTN3Q6NUS6 607 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 MYH4Q9Y623 1939 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 HMX2A2RU54 273 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 UPK1AO00322 258 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 SCGB1D1O95968 90 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 HLA-HP01893 362 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 INSM1Q01101 510 aaPredicted RBP16.4■□□□□ 0.22
COL18A1-202ENST00000355480 FAM53BQ14153 422 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 OR2B11Q5JQS5 317 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 MITD1Q8WV92 249 aa16.4■□□□□ 0.22
COL18A1-202ENST00000355480 PCNPQ8WW12 178 aaKnown RBP16.4■□□□□ 0.22
COL18A1-202ENST00000355480 NKX2-1P43699 371 aaPredicted RBP16.39■□□□□ 0.21
COL18A1-202ENST00000355480 FRG2CA6NGY1 282 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 XRCC2O43543 280 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 HRO43593 1189 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 RPS19P39019 145 aaKnown RBP16.39■□□□□ 0.21
COL18A1-202ENST00000355480 LHX8Q68G74 356 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 CREB3L2Q70SY1 520 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 OLIG1Q8TAK6 271 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 C4AP0C0L4 1744 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 ZFP92A6NM28 416 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 THNSL2Q86YJ6 484 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 GAB3Q8WWW8 586 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 ATF6BQ99941 703 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 ZNF2Q9BSG1 426 aaPredicted RBP16.39■□□□□ 0.21
COL18A1-202ENST00000355480 TEX101Q9BY14 249 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 MTCH1Q9NZJ7 389 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 PRSS37A4D1T9 235 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms