RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 DUSP23Q9BVJ7 150 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 SLCO5A1Q9H2Y9 848 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 B3GAT1Q9P2W7 334 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 EFNA2O43921 213 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 H2BFMP0C1H6 154 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 EPHA8P29322 1005 aaPredicted RBP19.75■□□□□ 0.75
UPF3A-201ENST00000351487 CXCL12P48061 93 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 ZNF41P51814 821 aaPredicted RBP19.75■□□□□ 0.75
UPF3A-201ENST00000351487 CAPZA1P52907 286 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 GUSBP11Q6P575 273 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 CPEB2Q7Z5Q1 589 aaKnown RBP19.75■□□□□ 0.75
UPF3A-201ENST00000351487 TMEM229BQ8NBD8 167 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 APMAPQ9HDC9 416 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 RARRES3Q9UL19 164 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 B3GALT1Q9Y5Z6 326 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 A0A1W2PQM1 296 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 DCDC2BA2VCK2 349 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 H3BML4 177 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 RLN1P04808 185 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 SPOCK1Q08629 439 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 CAMK2BQ13554 666 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 FOXRED1Q96CU9 486 aaPredicted RBP19.74■□□□□ 0.75
UPF3A-201ENST00000351487 MRPL13Q9BYD1 178 aaKnown RBP19.74■□□□□ 0.75
UPF3A-201ENST00000351487 ALX4Q9H161 411 aaPredicted RBP19.74■□□□□ 0.75
UPF3A-201ENST00000351487 FAM206AQ9NX38 181 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 OPN4Q9UHM6 478 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 ZNF107Q9UII5 783 aaPredicted RBP19.74■□□□□ 0.75
UPF3A-201ENST00000351487 PHF3Q92576 2039 aaKnown RBP19.74■□□□□ 0.75
UPF3A-201ENST00000351487 LY6G6EA0A0G2JKS1 128 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 ITGB2P05107 769 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 BIDP55957 195 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 OPCMLQ14982 345 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.74■□□□□ 0.75
UPF3A-201ENST00000351487 ADPRHL1Q8NDY3 354 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 C11orf40Q8WZ69 217 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 PNPLA2Q96AD5 504 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 SPSB2Q99619 263 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 CDCP1Q9H5V8 836 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 MYOTQ9UBF9 498 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 CYB5R1Q9UHQ9 305 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 WIF1Q9Y5W5 379 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 U3KQA8 63 aa19.74■□□□□ 0.75
UPF3A-201ENST00000351487 SHISA8B8ZZ34 492 aa19.73■□□□□ 0.75
UPF3A-201ENST00000351487 CFDP00746 253 aaPredicted RBP19.73■□□□□ 0.75
UPF3A-201ENST00000351487 CXCL2P19875 107 aa19.73■□□□□ 0.75
UPF3A-201ENST00000351487 RAB6AP20340 208 aa19.73■□□□□ 0.75
UPF3A-201ENST00000351487 MYBPHQ13203 477 aa19.73■□□□□ 0.75
UPF3A-201ENST00000351487 NR0B2Q15466 257 aa19.73■□□□□ 0.75
UPF3A-201ENST00000351487 CORO6Q6QEF8 472 aa19.73■□□□□ 0.75
UPF3A-201ENST00000351487 JAGN1Q8N5M9 183 aa19.73■□□□□ 0.75
UPF3A-201ENST00000351487 POC1BQ8TC44 478 aa19.73■□□□□ 0.75
UPF3A-201ENST00000351487 ELMOD3Q96FG2 381 aa19.73■□□□□ 0.75
UPF3A-201ENST00000351487 C1orf198Q9H425 327 aa19.73■□□□□ 0.75
UPF3A-201ENST00000351487 MAB21L2Q9Y586 359 aa19.73■□□□□ 0.75
UPF3A-201ENST00000351487 TMEM265A0A087WTH1 108 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 LOC101059948A0A1B0GTJ6 334 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 CPED1A4D0V7 1026 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 ZFAND5O76080 213 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 ACSM4P0C7M7 580 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 ZNF627Q7L945 461 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 MUC20Q8N307 709 aaPredicted RBP19.72■□□□□ 0.75
UPF3A-201ENST00000351487 OR2AK2Q8NG84 335 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 OR10H5Q8NGA6 315 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 DVL3Q92997 716 aaPredicted RBP19.72■□□□□ 0.75
UPF3A-201ENST00000351487 SLAMF6Q96DU3 332 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 SDHAF3Q9NRP4 125 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 CENPMQ9NSP4 180 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 IGHV5-10-1A0A0J9YXX1 117 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 P2RY10O00398 339 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 LMX1BO60663 402 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 TTRP02766 147 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 NFYAP23511 347 aaPredicted RBP19.72■□□□□ 0.75
UPF3A-201ENST00000351487 H2BFSP57053 126 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 PMPCAQ10713 525 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 TMEM205Q6UW68 189 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 OR8S1Q8NH09 359 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 EMC6Q9BV81 110 aa19.72■□□□□ 0.75
UPF3A-201ENST00000351487 OR6C65A6NJZ3 312 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 RGS11O94810 467 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 RAB3DO95716 219 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 CCL7P80098 99 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 POU4F3Q15319 338 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 MPPED2Q15777 294 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 CCDC28AQ8IWP9 274 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 OR10G3Q8NGC4 313 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 OR4D6Q8NGJ1 314 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 OR5M1Q8NGP8 315 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 WDR89Q96FK6 387 aaPredicted RBP19.71■□□□□ 0.75
UPF3A-201ENST00000351487 SLC26A1Q9H2B4 701 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 EXO5Q9H790 373 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 UPB1Q9UBR1 384 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 TUBAL3A6NHL2 446 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 MCRIP1C9JLW8 97 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 L7N2F9 121 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 HSD11B1P28845 292 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 P2RY4P51582 365 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 TOR2AQ5JU69 321 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 THEM4Q5T1C6 240 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 PTCRAQ6ISU1 281 aaPredicted RBP19.71■□□□□ 0.75
UPF3A-201ENST00000351487 C3orf33Q6P1S2 294 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms