RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 KLF9Q13886 244 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 MIDNQ504T8 468 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 SLC39A5Q6ZMH5 540 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 FAM174AQ8TBP5 190 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 RXFP4Q8TDU9 374 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 CPNE4Q96A23 557 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 SIRT3Q9NTG7 399 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 GOLGB1Q14789 3259 aaKnown RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF354AO60765 605 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 HOXB9P17482 250 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 ADRA2CP18825 462 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 FCGR2CP31995 323 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 CTHP32929 405 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 SSTP61278 116 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 RAB31Q13636 194 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF273Q14593 569 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 SLC36A2Q495M3 483 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 PRR22Q8IZ63 422 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF687Q8N1G0 1237 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 TP53I13Q8NBR0 393 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 KCMF1Q9P0J7 381 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF724A8MTY0 619 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 H7C1Q1 480 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 PHF1O43189 567 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 NME1P15531 152 aaKnown RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 TAS2R30P59541 319 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 OR5AP2Q8NGF4 316 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 TMEM18Q96B42 140 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 TSSK2Q96PF2 358 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 VSX1Q9NZR4 365 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF98A6NK75 572 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 A8MVM7 634 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 RAB27BO00194 218 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 MBTPS2O43462 519 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 MPC2O95563 127 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 ATF1P18846 271 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 PSMB3P49720 205 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 GSK3AP49840 483 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 DOK4Q8TEW6 326 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 STARD5Q9NSY2 213 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 TAS2R4Q9NYW5 299 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 R4GMQ9 66 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 TNS1Q9HBL0 1735 aaKnown RBP4.35□□□□□ -1.71
CSMD3-203ENST00000343508 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.35□□□□□ -1.71
CSMD3-203ENST00000343508 RNF212BA8MTL3 300 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 FTCDNL1E5RQL4 147 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 ZFPL1O95159 310 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 ITGB2P05107 769 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 SNRPEP62304 92 aaKnown RBP4.35□□□□□ -1.71
CSMD3-203ENST00000343508 LINC00518Q8N0U6 118 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 OR51A2Q8NGJ7 313 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 OR2G3Q8NGZ4 309 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 ZFPM2Q8WW38 1151 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF681Q96N22 645 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 UQCC1Q9NVA1 299 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 A0A087WUJ7 227 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 A0A0A6YYC8 382 aaPredicted RBP4.35□□□□□ -1.71
CSMD3-203ENST00000343508 PRSS37A4D1T9 235 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 OR6C68A6NDL8 312 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 H0YGG7 62 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 I3L1I5 382 aaPredicted RBP4.35□□□□□ -1.71
CSMD3-203ENST00000343508 IL33O95760 270 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 CD1AP06126 327 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 RAB5AP20339 215 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 FABP9Q0Z7S8 132 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 PJVKQ0ZLH3 352 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 OLIG3Q7RTU3 272 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 SLC22A12Q96S37 553 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 NUDT9Q9BW91 350 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 TEX101Q9BY14 249 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 PLEKHA3Q9HB20 300 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF346Q9UL40 294 aaKnown RBP4.35□□□□□ -1.71
CSMD3-203ENST00000343508 FLVCR1Q9Y5Y0 555 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 OR6C76A6NM76 312 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 UTS2O95399 124 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 OR1D4P47884 311 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 RAB11AP62491 216 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 MSMO1Q15800 293 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 TMEM41BQ5BJD5 291 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 RAET1LQ5VY80 246 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 DMKNQ6E0U4 476 aaPredicted RBP4.35□□□□□ -1.71
CSMD3-203ENST00000343508 ADIPOR2Q86V24 386 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 OR4D6Q8NGJ1 314 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 TCRBV16S1A1N1A0A5B0 115 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 OGG1O15527 345 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 CBX7O95931 251 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 ACRP10323 421 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF250P15622 560 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF85Q03923 595 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 SLC17A1Q14916 467 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 BATFQ16520 125 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 GCDHQ92947 438 aaPredicted RBP4.35□□□□□ -1.71
CSMD3-203ENST00000343508 TSLPQ969D9 159 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 CNRIP1Q96F85 164 aaPredicted RBP4.35□□□□□ -1.71
CSMD3-203ENST00000343508 C2orf50Q96LR7 162 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 SDHCQ99643 169 aaPredicted RBP4.35□□□□□ -1.71
CSMD3-203ENST00000343508 SLC35B3Q9H1N7 401 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 ACAD8Q9UKU7 415 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 MFSD2BA6NFX1 497 aa4.35□□□□□ -1.71
CSMD3-203ENST00000343508 HSBP1L1C9JCN9 74 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms