RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 MLC1Q15049 377 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 GPR32P1Q8NGA4 272 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 ABHD5Q8WTS1 349 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 C8orf44Q96CB5 159 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 SUCNR1Q9BXA5 334 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 CNTNAP3Q9BZ76 1288 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.34□□□□□ -1.23
UBE4B-202ENST00000343090 IGLV3-16A0A075B6K0 115 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 A0A1B0GX78 115 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 ARRDC5A6NEK1 342 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 HOXD4P09016 255 aaPredicted RBP7.34□□□□□ -1.23
UBE4B-202ENST00000343090 NAGAP17050 411 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 SSR4P51571 173 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 ZNF136P52737 540 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 KIRREL2Q6UWL6 708 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 H1FNTQ75WM6 255 aaPredicted RBP7.34□□□□□ -1.23
UBE4B-202ENST00000343090 TEX101Q9BY14 249 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 PARP12Q9H0J9 701 aaKnown RBP7.34□□□□□ -1.23
UBE4B-202ENST00000343090 ZNF576Q9H609 170 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 ZNF286AQ9HBT8 521 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 CYSLTR2Q9NS75 346 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 NEU3Q9UQ49 428 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 PCDHGA5Q9Y5G8 931 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 CACNA1CQ13936 2221 aa7.34□□□□□ -1.23
UBE4B-202ENST00000343090 OR2F2O95006 317 aa7.34□□□□□ -1.24
UBE4B-202ENST00000343090 WNT1P04628 370 aa7.34□□□□□ -1.24
UBE4B-202ENST00000343090 GLI4P10075 376 aa7.34□□□□□ -1.24
UBE4B-202ENST00000343090 SDHAP31040 664 aa7.34□□□□□ -1.24
UBE4B-202ENST00000343090 SLC35A1P78382 337 aa7.34□□□□□ -1.24
UBE4B-202ENST00000343090 PLA2G7Q13093 441 aa7.34□□□□□ -1.24
UBE4B-202ENST00000343090 IKZF1Q13422 519 aa7.34□□□□□ -1.24
UBE4B-202ENST00000343090 OR2F1Q13607 317 aa7.34□□□□□ -1.24
UBE4B-202ENST00000343090 MLF2Q15773 248 aaPredicted RBP7.34□□□□□ -1.24
UBE4B-202ENST00000343090 SFTPA1Q8IWL2 248 aa7.34□□□□□ -1.24
UBE4B-202ENST00000343090 SKA3Q8IX90 412 aa7.34□□□□□ -1.24
UBE4B-202ENST00000343090 KLHDC8BQ8IXV7 354 aa7.34□□□□□ -1.24
UBE4B-202ENST00000343090 C10orf111Q8N326 155 aa7.34□□□□□ -1.24
UBE4B-202ENST00000343090 TMED6Q8WW62 240 aa7.34□□□□□ -1.24
UBE4B-202ENST00000343090 WDR89Q96FK6 387 aaPredicted RBP7.34□□□□□ -1.24
UBE4B-202ENST00000343090 CALHM2Q9HA72 323 aa7.34□□□□□ -1.24
UBE4B-202ENST00000343090 FBXL4Q9UKA2 621 aa7.34□□□□□ -1.24
UBE4B-202ENST00000343090 A0A1W2PNR3 127 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 TMEM235A6NFC5 223 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 SIGLEC5O15389 551 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 PLRG1O43660 514 aaKnown RBP7.33□□□□□ -1.24
UBE4B-202ENST00000343090 ALOX12BO75342 701 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 RPA2P15927 270 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 IDH3GP51553 393 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-202ENST00000343090 RAB4BP61018 213 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 SIGLEC14Q08ET2 396 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 PHLDA2Q53GA4 152 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 LAIR2Q6ISS4 152 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 GRINAQ7Z429 371 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 FAM71CQ8NEG0 241 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 OR9K2Q8NGE7 335 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 OR51E1Q8TCB6 317 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 FN3KRPQ9HA64 309 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 KCNG2Q9UJ96 466 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 A0A087WZY1 265 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 A0A1W2PS29 197 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 PRAMEF25A6NGN4 478 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 NRG2O14511 850 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-202ENST00000343090 PMS2P2O95744 297 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 SPP1P10451 314 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 CD80P33681 288 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 P2RX1P51575 399 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 CDK5R1Q15078 307 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 ELAVL1Q15717 326 aaKnown RBP7.33□□□□□ -1.24
UBE4B-202ENST00000343090 OGFOD3Q6PK18 319 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 FJX1Q86VR8 437 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 MISPQ8IVT2 679 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 NAXDQ8IW45 347 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 SUMF1Q8NBK3 374 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 CLEC1AQ8NC01 280 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 AGBL5Q8NDL9 886 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 OR2AK2Q8NG84 335 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 NAT6Q93015 286 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 DCBLD2Q96PD2 775 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 FGF20Q9NP95 211 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-202ENST00000343090 PRDM7Q9NQW5 492 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 MED29Q9NX70 200 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 RAB22AQ9UL26 194 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 PIGLQ9Y2B2 252 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 FOCADQ5VW36 1801 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 SNRPGP15A8MWD9 76 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 GATCO43716 136 aaKnown RBP7.33□□□□□ -1.24
UBE4B-202ENST00000343090 TK1P04183 234 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 CD27P26842 260 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 UBE2KP61086 200 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 ZNF684Q5T5D7 378 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 C12orf73Q69YU5 71 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 UQCC3Q6UW78 93 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 NHLRC1Q6VVB1 395 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 LINC00696Q6ZRV3 163 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 OVCH2Q7RTZ1 564 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 CAMKMTQ7Z624 323 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 LINC01555Q8NAE3 123 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 GOT1L1Q8NHS2 421 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-202ENST00000343090 PSMF1Q92530 271 aa7.33□□□□□ -1.24
UBE4B-202ENST00000343090 PHYHIPQ92561 330 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms