RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 MTHFD2LQ9H903 347 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 OTX2P32243 289 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SLC6A11P48066 632 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 RPS13P62277 151 aaKnown RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 UBALD2Q8IYN6 164 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF485Q8NCK3 441 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SLCO4A1Q96BD0 722 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SLC22A31A6NKX4 558 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ADAP1O75689 374 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 FABP3P05413 133 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SH3BP2P78314 561 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 NCEH1Q6PIU2 408 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 DTWD1Q8N5C7 304 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 C2orf15Q8WU43 125 aaKnown RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 APIPQ96GX9 242 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 NRSN2Q9GZP1 204 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CHODLQ9H9P2 273 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 A0A1W2PN81 502 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 NT5EP21589 574 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SOX18P35713 384 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CHRNA7P36544 502 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CHRFAM7AQ494W8 412 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 GLYR1Q49A26 553 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 DLEU7Q6UYE1 221 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CSNK1A1LQ8N752 337 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 TMEM18Q96B42 140 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 C1orf123Q9NWV4 160 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 GALTP07902 379 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ERVPABLB-1P60509 514 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 BSXQ3C1V8 233 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 TEX26Q8N6G2 289 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 REEP6Q96HR9 211 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 TOX2Q96NM4 488 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CTSFQ9UBX1 484 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 A0A087WWC5 75 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CYB5R3P00387 301 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CXCR1P25024 350 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 COMPP49747 757 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 TOMM5Q8N4H5 51 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 AQP11Q8NBQ7 271 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 OR52H1Q8NGJ2 320 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 OR13C9Q8NGT0 318 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 PEX11GQ96HA9 241 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SFXN2Q96NB2 322 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ABCG5Q9H222 651 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF586Q9NXT0 402 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 EDNRBP24530 442 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CNR2P34972 360 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 TECRLQ5HYJ1 363 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 FAM209AQ5JX71 171 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 MUC15Q8N387 334 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ZFP62Q8NB50 900 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 GLYATL2Q8WU03 294 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 LINC01599Q8WXQ3 324 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 FRZBQ92765 325 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 TM7SF3Q9NS93 570 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 EPHB3P54753 998 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 OR5I1Q13606 314 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 APOBEC3HQ6NTF7 200 aaKnown RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SULF2Q8IWU5 870 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CARFQ8N187 725 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CHST14Q8NCH0 376 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 OR52N2Q8NGI0 321 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 GPR119Q8TDV5 335 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ISOC2Q96AB3 205 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 IMP4Q96G21 291 aaKnown RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 NELL2Q99435 816 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 RPS6KB2Q9UBS0 482 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SLC25A27O95847 323 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ADIRFQ15847 76 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 FAM174BQ3ZCQ3 159 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SAMD13Q5VXD3 122 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SUMF2Q8NBJ7 301 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 GNPDA2Q8TDQ7 276 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 RAB11FIP5Q9BXF6 653 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 NPVFQ9HCQ7 196 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CXCL11O14625 94 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 TFPI2P48307 235 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 B3GNT8Q7Z7M8 397 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 TMEM173Q86WV6 379 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 BAGE3Q86Y29 109 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 BAGE2Q86Y30 109 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 PIGXQ8TBF5 258 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 PHOSPHO2Q8TCD6 241 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ARNTL2Q8WYA1 636 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 OR7D2Q96RA2 312 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 PLEKHA2Q9HB19 425 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 C1QAP02745 245 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CD1DP15813 335 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ARSBP15848 533 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SLC39A11Q8N1S5 342 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CPXM2Q8N436 756 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SENP5Q96HI0 755 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 KLHL15Q96M94 604 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 PARD6GQ9BYG4 376 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 PLEKHA1Q9HB21 404 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 PRDM7Q9NQW5 492 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 C2orf42Q9NWW7 574 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 COPS7AQ9UBW8 275 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms