RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 CCDC28AQ8IWP9 274 aa13.27□□□□□ -0.29
RET-201ENST00000340058 SULF2Q8IWU5 870 aa13.27□□□□□ -0.29
RET-201ENST00000340058 SGPP2Q8IWX5 399 aa13.27□□□□□ -0.29
RET-201ENST00000340058 GJC3Q8NFK1 279 aa13.27□□□□□ -0.29
RET-201ENST00000340058 ATF6BQ99941 703 aa13.27□□□□□ -0.29
RET-201ENST00000340058 MENTQ9BUN1 341 aa13.27□□□□□ -0.29
RET-201ENST00000340058 KCNK15Q9H427 330 aa13.27□□□□□ -0.29
RET-201ENST00000340058 INTS1Q8N201 2190 aaKnown RBP13.27□□□□□ -0.29
RET-201ENST00000340058 MED13LQ71F56 2210 aa13.27□□□□□ -0.29
RET-201ENST00000340058 LOC102725191A0A1B0GVB3 256 aa13.27□□□□□ -0.29
RET-201ENST00000340058 FUT5Q11128 374 aa13.27□□□□□ -0.29
RET-201ENST00000340058 WDR88Q6ZMY6 472 aa13.27□□□□□ -0.29
RET-201ENST00000340058 COMMD7Q86VX2 200 aa13.27□□□□□ -0.29
RET-201ENST00000340058 UBALD2Q8IYN6 164 aa13.27□□□□□ -0.29
RET-201ENST00000340058 LIPHQ8WWY8 451 aa13.27□□□□□ -0.29
RET-201ENST00000340058 C11orf40Q8WZ69 217 aa13.27□□□□□ -0.29
RET-201ENST00000340058 MEX3AA1L020 520 aaKnown RBP13.26□□□□□ -0.29
RET-201ENST00000340058 PDGFBP01127 241 aaPredicted RBP13.26□□□□□ -0.29
RET-201ENST00000340058 FAPQ12884 760 aa13.26□□□□□ -0.29
RET-201ENST00000340058 IKZF1Q13422 519 aa13.26□□□□□ -0.29
RET-201ENST00000340058 PDCD1Q15116 288 aa13.26□□□□□ -0.29
RET-201ENST00000340058 GAB4Q2WGN9 574 aa13.26□□□□□ -0.29
RET-201ENST00000340058 MAMSTRQ6ZN01 415 aa13.26□□□□□ -0.29
RET-201ENST00000340058 CCDC190Q86UF4 302 aa13.26□□□□□ -0.29
RET-201ENST00000340058 PDZD9Q8IXQ8 264 aa13.26□□□□□ -0.29
RET-201ENST00000340058 SYS1Q8N2H4 156 aa13.26□□□□□ -0.29
RET-201ENST00000340058 GTPBP8Q8N3Z3 284 aaPredicted RBP13.26□□□□□ -0.29
RET-201ENST00000340058 SLC19A3Q9BZV2 496 aa13.26□□□□□ -0.29
RET-201ENST00000340058 C20orf85Q9H1P6 137 aa13.26□□□□□ -0.29
RET-201ENST00000340058 ADGRL4Q9HBW9 690 aa13.26□□□□□ -0.29
RET-201ENST00000340058 MLXQ9UH92 298 aa13.26□□□□□ -0.29
RET-201ENST00000340058 TMEM184BQ9Y519 407 aaPredicted RBP13.26□□□□□ -0.29
RET-201ENST00000340058 ZFHX2Q9C0A1 2572 aaPredicted RBP13.26□□□□□ -0.29
RET-201ENST00000340058 MASP2O00187 686 aa13.26□□□□□ -0.29
RET-201ENST00000340058 AKR7A2O43488 359 aa13.26□□□□□ -0.29
RET-201ENST00000340058 IGKV1D-16P01601 117 aa13.26□□□□□ -0.29
RET-201ENST00000340058 TPOP07202 933 aa13.26□□□□□ -0.29
RET-201ENST00000340058 UBCP0CG48 685 aaKnown RBP13.26□□□□□ -0.29
RET-201ENST00000340058 TAF9Q16594 264 aa13.26□□□□□ -0.29
RET-201ENST00000340058 COL13A1Q5TAT6 717 aaPredicted RBP13.26□□□□□ -0.29
RET-201ENST00000340058 OR52N5Q8NH56 324 aa13.26□□□□□ -0.29
RET-201ENST00000340058 RRNAD1Q96FB5 475 aaKnown RBP13.26□□□□□ -0.29
RET-201ENST00000340058 TSNAXQ99598 290 aaKnown RBP13.26□□□□□ -0.29
RET-201ENST00000340058 NEURL2Q9BR09 285 aa13.26□□□□□ -0.29
RET-201ENST00000340058 PPA2Q9H2U2 334 aa13.26□□□□□ -0.29
RET-201ENST00000340058 LANCL2Q9NS86 450 aa13.26□□□□□ -0.29
RET-201ENST00000340058 RER1O15258 196 aa13.26□□□□□ -0.29
RET-201ENST00000340058 TBXA2RP21731 343 aa13.26□□□□□ -0.29
RET-201ENST00000340058 OMGP23515 440 aa13.26□□□□□ -0.29
RET-201ENST00000340058 MPLP40238 635 aa13.26□□□□□ -0.29
RET-201ENST00000340058 ZNF136P52737 540 aa13.26□□□□□ -0.29
RET-201ENST00000340058 ATP1B3P54709 279 aa13.26□□□□□ -0.29
RET-201ENST00000340058 FOXK1P85037 733 aa13.26□□□□□ -0.29
RET-201ENST00000340058 SECTM1Q8WVN6 248 aa13.26□□□□□ -0.29
RET-201ENST00000340058 FOXRED1Q96CU9 486 aaPredicted RBP13.26□□□□□ -0.29
RET-201ENST00000340058 TRMT61AQ96FX7 289 aaKnown RBP13.26□□□□□ -0.29
RET-201ENST00000340058 PSD2Q9BQI7 771 aa13.26□□□□□ -0.29
RET-201ENST00000340058 PRAF2O60831 178 aa13.25□□□□□ -0.29
RET-201ENST00000340058 CD3DP04234 171 aa13.25□□□□□ -0.29
RET-201ENST00000340058 HOXC4P09017 264 aaPredicted RBP13.25□□□□□ -0.29
RET-201ENST00000340058 CLDN15P56746 228 aa13.25□□□□□ -0.29
RET-201ENST00000340058 KIAA1958Q8N8K9 716 aa13.25□□□□□ -0.29
RET-201ENST00000340058 KCNG3Q8TAE7 436 aa13.25□□□□□ -0.29
RET-201ENST00000340058 ST8SIA1Q92185 356 aa13.25□□□□□ -0.29
RET-201ENST00000340058 EMC3Q9P0I2 261 aa13.25□□□□□ -0.29
RET-201ENST00000340058 DNAJB11Q9UBS4 358 aa13.25□□□□□ -0.29
RET-201ENST00000340058 B3GALT5Q9Y2C3 310 aa13.25□□□□□ -0.29
RET-201ENST00000340058 C4orf47A7E2U8 309 aa13.25□□□□□ -0.29
RET-201ENST00000340058 H3BMH7 237 aa13.25□□□□□ -0.29
RET-201ENST00000340058 TP53P04637 393 aaPredicted RBP13.25□□□□□ -0.29
RET-201ENST00000340058 RAD52P43351 418 aa13.25□□□□□ -0.29
RET-201ENST00000340058 RFX2P48378 723 aa13.25□□□□□ -0.29
RET-201ENST00000340058 PHLDA2Q53GA4 152 aa13.25□□□□□ -0.29
RET-201ENST00000340058 C3P1Q6ZMU1 363 aa13.25□□□□□ -0.29
RET-201ENST00000340058 SPAG16Q8N0X2 631 aa13.25□□□□□ -0.29
RET-201ENST00000340058 OR4D9Q8NGE8 314 aa13.25□□□□□ -0.29
RET-201ENST00000340058 EDEM2Q9BV94 578 aa13.25□□□□□ -0.29
RET-201ENST00000340058 MYOTQ9UBF9 498 aa13.25□□□□□ -0.29
RET-201ENST00000340058 PCOLCE2Q9UKZ9 415 aa13.25□□□□□ -0.29
RET-201ENST00000340058 PKDREJQ9NTG1 2253 aa13.25□□□□□ -0.29
RET-201ENST00000340058 AIPO00170 330 aa13.25□□□□□ -0.29
RET-201ENST00000340058 ANGPTL7O43827 346 aa13.25□□□□□ -0.29
RET-201ENST00000340058 DPM1O60762 260 aa13.25□□□□□ -0.29
RET-201ENST00000340058 NXPH3O95157 252 aa13.25□□□□□ -0.29
RET-201ENST00000340058 WDR38Q5JTN6 314 aa13.25□□□□□ -0.29
RET-201ENST00000340058 ADGRE4PQ86SQ3 457 aa13.25□□□□□ -0.29
RET-201ENST00000340058 DOK1Q99704 481 aa13.25□□□□□ -0.29
RET-201ENST00000340058 MFRPQ9BY79 579 aa13.25□□□□□ -0.29
RET-201ENST00000340058 GDF2Q9UK05 429 aaPredicted RBP13.25□□□□□ -0.29
RET-201ENST00000340058 OTOFQ9HC10 1997 aa13.25□□□□□ -0.29
RET-201ENST00000340058 SMCO3A2RU48 225 aa13.24□□□□□ -0.29
RET-201ENST00000340058 M0R135 149 aa13.24□□□□□ -0.29
RET-201ENST00000340058 S100A9P06702 114 aaKnown RBP13.24□□□□□ -0.29
RET-201ENST00000340058 FAHP16930 419 aa13.24□□□□□ -0.29
RET-201ENST00000340058 AGTR1P30556 359 aa13.24□□□□□ -0.29
RET-201ENST00000340058 RGS19P49795 217 aa13.24□□□□□ -0.29
RET-201ENST00000340058 SPEM2Q0P670 501 aa13.24□□□□□ -0.29
RET-201ENST00000340058 BAMBIQ13145 260 aa13.24□□□□□ -0.29
RET-201ENST00000340058 ASAH1Q13510 395 aa13.24□□□□□ -0.29
RET-201ENST00000340058 INPP5JQ15735 1006 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms