RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 PI4KAP42356 2102 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 A0A0G2JK05 382 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 NUDT1P36639 197 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 RFC3P40938 356 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 PMPCAQ10713 525 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 CLEC9AQ6UXN8 241 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 TMUB2Q71RG4 321 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 TMEM200AQ86VY9 491 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 OR5T2Q8NGG2 359 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 OR10R2Q8NGX6 335 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 TCTN2Q96GX1 697 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 UQCC2Q9BRT2 126 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 LMF2Q9BU23 707 aaKnown RBP10.76□□□□□ -0.69
USP1-201ENST00000339950 STEAP1Q9UHE8 339 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 B3GALT1Q9Y5Z6 326 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 A0A1W2PP11 408 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 VSTM2BA6NLU5 285 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 SRPX2O60687 465 aaPredicted RBP10.76□□□□□ -0.69
USP1-201ENST00000339950 S100A11P31949 105 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 AKR1C3P42330 323 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 HNRNPKP61978 463 aaKnown RBP eCLIP10.76□□□□□ -0.69
USP1-201ENST00000339950 EFNB1P98172 346 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 SERTAD2Q14140 314 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 GALNT16Q8N428 558 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 ANGPTL6Q8NI99 470 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 CCDC107Q8WV48 283 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 SLC39A7Q92504 469 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 CCDC74AQ96AQ1 378 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 MRPL38Q96DV4 380 aaKnown RBP10.76□□□□□ -0.69
USP1-201ENST00000339950 PGAM5Q96HS1 289 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 MOKQ9UQ07 419 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 LOC101059948A0A1B0GTJ6 334 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 GGT3PA6NGU5 568 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 NUDT21O43809 227 aaKnown RBP10.76□□□□□ -0.69
USP1-201ENST00000339950 SCGNO76038 276 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 WNT11O96014 354 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 AMY2BP19961 511 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 TUSC1Q2TAM9 212 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 TMEM81Q6P7N7 255 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 PAPD4Q6PIY7 484 aaKnown RBP10.76□□□□□ -0.69
USP1-201ENST00000339950 RGP1Q92546 391 aaPredicted RBP10.76□□□□□ -0.69
USP1-201ENST00000339950 MR1Q95460 341 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 DUSP15Q9H1R2 295 aaPredicted RBP10.76□□□□□ -0.69
USP1-201ENST00000339950 UPB1Q9UBR1 384 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 MED13LQ71F56 2210 aa10.76□□□□□ -0.69
USP1-201ENST00000339950 SPTBN1Q01082 2364 aaKnown RBP10.76□□□□□ -0.69
USP1-201ENST00000339950 FAM230AA0A1W2PPH8 454 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 KRBOX1C9JBD0 128 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 PTBP1P26599 531 aaKnown RBP eCLIP10.75□□□□□ -0.69
USP1-201ENST00000339950 SEC61A1P61619 476 aaKnown RBP10.75□□□□□ -0.69
USP1-201ENST00000339950 OVCH1Q7RTY7 1134 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 ESX1Q8N693 406 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 ADAT1Q9BUB4 502 aaKnown RBP10.75□□□□□ -0.69
USP1-201ENST00000339950 RPS10P5Q9NQ39 176 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 BIN3Q9NQY0 253 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 FER1L5A0AVI2 2057 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 YPEL5P62699 121 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 MGAT2Q10469 447 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 MOGAT2Q3SYC2 334 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 PEG10Q86TG7 708 aaKnown RBP10.75□□□□□ -0.69
USP1-201ENST00000339950 VASH2Q86V25 355 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 C20orf196Q8IYI0 205 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 ZNF485Q8NCK3 441 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 OR2AK2Q8NG84 335 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 NANPQ8TBE9 248 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 STT3BQ8TCJ2 826 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 DCBLD2Q96PD2 775 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 EMC3Q9P0I2 261 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 OR52A1Q9UKL2 312 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 MMP17Q9ULZ9 603 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 MEX3AA1L020 520 aaKnown RBP10.75□□□□□ -0.69
USP1-201ENST00000339950 KLF4O43474 513 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 DUX1O43812 170 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 PATE4P0C8F1 98 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 TMEM225BP0DP42 221 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 VSIG10L2P0DP72 767 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 ZNF43P17038 809 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 CXCL2P19875 107 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 ABCD3P28288 659 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 BTCP35070 178 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 RAB5BP61020 215 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 BDH1Q02338 343 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 LRRTM1Q86UE6 522 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 GABRG1Q8N1C3 465 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 OR1J4Q8NGS1 313 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 SLX1AQ9BQ83 275 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 EIF5A2Q9GZV4 153 aaKnown RBP10.75□□□□□ -0.69
USP1-201ENST00000339950 PTGES2Q9H7Z7 377 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 LSM5Q9Y4Y9 91 aaKnown RBP10.75□□□□□ -0.69
USP1-201ENST00000339950 LRP12Q9Y561 859 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 MEIKINA0A087WXM9 373 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 IGHV4-34P06331 123 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 RAB40ALP0C0E4 278 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 CSNK2A1P68400 391 aaPredicted RBP10.75□□□□□ -0.69
USP1-201ENST00000339950 DYRK1AQ13627 763 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 CCINQ13939 588 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 PAN3Q58A45 887 aaKnown RBP10.75□□□□□ -0.69
USP1-201ENST00000339950 TRILQ7L0X0 811 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 CSNK2A3Q8NEV1 391 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 RAB40AQ8WXH6 277 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms