RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 OR5D18Q8NGL1 313 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 OR13C8Q8NGS7 320 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 MARCH1Q8TCQ1 289 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 GPX8Q8TED1 209 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 TMEM106CQ9BVX2 250 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 MRPL22Q9NWU5 206 aaKnown RBP14.49□□□□□ -0.09
SCARB1-202ENST00000339570 TRBV5-7A0A0A0MS05 114 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 A0A1B0GV50 99 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 A6NCN8 305 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 NPIPB9F8W1W9 429 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 H3BML4 177 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 ADAP1O75689 374 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 NPY4RP50391 375 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 SKP2Q13309 424 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 RBM39Q14498 530 aaKnown RBP14.49□□□□□ -0.09
SCARB1-202ENST00000339570 GTPBP8Q8N3Z3 284 aaPredicted RBP14.49□□□□□ -0.09
SCARB1-202ENST00000339570 NAXEQ8NCW5 288 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 BANF2Q9H503 90 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 POLE3Q9NRF9 147 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 RASL12Q9NYN1 266 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 TMEM269A0A1B0GVZ9 245 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 TUBAL3A6NHL2 446 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 TNFP01375 233 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 ASAH2BP0C7U1 165 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 PVALBP20472 110 aaPredicted RBP14.49□□□□□ -0.09
SCARB1-202ENST00000339570 CD96P40200 585 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 INSM1Q01101 510 aaPredicted RBP14.49□□□□□ -0.09
SCARB1-202ENST00000339570 VWA2Q5GFL6 755 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 EEF1A1P5Q5VTE0 462 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 TMEM17Q86X19 198 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 C15orf40Q8WUR7 153 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 MCHR2Q969V1 340 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 OR8B4Q96RC9 309 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 FOXQ1Q9C009 403 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 CSAG2Q9Y5P2 127 aa14.49□□□□□ -0.09
SCARB1-202ENST00000339570 MPTX1A8MV57 137 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 ABCD4O14678 606 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 UBBP0CG47 229 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 UBCP0CG48 685 aaKnown RBP14.48□□□□□ -0.09
SCARB1-202ENST00000339570 PNMTP11086 282 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 PPIAP62937 165 aaKnown RBP14.48□□□□□ -0.09
SCARB1-202ENST00000339570 RPS27AP62979 156 aaKnown RBP14.48□□□□□ -0.09
SCARB1-202ENST00000339570 UBA52P62987 128 aaKnown RBP14.48□□□□□ -0.09
SCARB1-202ENST00000339570 C7orf61Q8IZ16 206 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 EXD3Q8N9H8 876 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 ZNF587Q96SQ5 575 aaPredicted RBP14.48□□□□□ -0.09
SCARB1-202ENST00000339570 SLC7A5P2Q9GIP4 190 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 TMEM14AQ9Y6G1 99 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 FREM2Q5SZK8 3169 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 ZNF208O43345 1280 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 STK17BO94768 372 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 ITGB2P05107 769 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 S100A10P60903 97 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 HLA-DQA1Q5Y7H0 255 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 ZNF679Q8IYX0 411 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 LRRC75AQ8NAA5 344 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 OR5M8Q8NGP6 311 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 CMSS1Q9BQ75 279 aaKnown RBP14.48□□□□□ -0.09
SCARB1-202ENST00000339570 A0A1B0GW55 424 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 RNF222A6NCQ9 220 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 DUX4L2P0CJ85 424 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 DUX4L3P0CJ86 424 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 DUX4L4P0CJ87 422 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 DUX4L5P0CJ88 424 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 DUX4L6P0CJ89 424 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 DUX4L7P0CJ90 424 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 MYF5P13349 255 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 SERPINF1P36955 418 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 CASRP41180 1078 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 RSPO4Q2I0M5 234 aaPredicted RBP14.48□□□□□ -0.09
SCARB1-202ENST00000339570 CLVS2Q5SYC1 327 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 FBXO17Q96EF6 278 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 NICN1Q9BSH3 213 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 SEC61A2Q9H9S3 476 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 DUX4Q9UBX2 424 aa14.48□□□□□ -0.09
SCARB1-202ENST00000339570 C2orf16Q68DN1 1984 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 A0A1W2PP11 408 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 ZNF823P16415 610 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 IKZF1Q13422 519 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 OR52N4Q8NGI2 321 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 PCDH15Q96QU1 1955 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 SULT1C2O00338 296 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 SDCBPO00560 298 aaPredicted RBP14.47□□□□□ -0.09
SCARB1-202ENST00000339570 OR2T1O43869 369 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 THEGLP0DJG4 465 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 SLC25A1P53007 311 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 ELOCQ15369 112 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 CARD17Q5XLA6 110 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 H3F3CQ6NXT2 135 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 LDLRAD3Q86YD5 345 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 TMEM41AQ96HV5 264 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 SOX7Q9BT81 388 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 MFRPQ9BY79 579 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 GAREM1Q9H706 876 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 CNTD2Q9H8S5 307 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 POLR1DQ9Y2S0 133 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 FAM186AA6NE01 2351 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 DENND4AQ7Z401 1863 aa14.47□□□□□ -0.09
SCARB1-202ENST00000339570 MED19A0JLT2 244 aaPredicted RBP14.46□□□□□ -0.09
SCARB1-202ENST00000339570 PRSS37A4D1T9 235 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms