RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 TUBG2Q9NRH3 451 aa3.78□□□□□ -1.81
NEDD4-201ENST00000338963 SLC2A6Q9UGQ3 507 aa3.78□□□□□ -1.81
NEDD4-201ENST00000338963 RAD51DO75771 328 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 CHRM2P08172 466 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 KCNE1P15382 129 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 H2BFSP57053 126 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 LCN2P80188 198 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 CEBPEQ15744 281 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM144Q7Z5S9 345 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 C20orf196Q8IYI0 205 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF679Q8IYX0 411 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 IQCF1Q8N6M8 205 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ASB5Q8WWX0 329 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 TFAP2BQ92481 460 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ARRDC3Q96B67 414 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 TEX37Q96LM6 180 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 TBX15Q96SF7 602 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 SIGMAR1Q99720 223 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 PRRX2Q99811 253 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 PSMG3Q9BT73 122 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-201ENST00000338963 TPPP3Q9BW30 176 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 RAB18Q9NP72 206 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ACER3Q9NUN7 267 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 C3P01024 1663 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 A0A1B0GUL6 1792 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 MAP1LC3B2A6NCE7 125 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 GALR2O43603 387 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-201ENST00000338963 FGF1P05230 155 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 CDK2P24941 298 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 FPR2P25090 351 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 GCH1P30793 250 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 CEACAM8P31997 349 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-201ENST00000338963 SOX10P56693 466 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ACSM2AQ08AH3 577 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 SPIN3Q5JUX0 258 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 SPATA46Q5T0L3 261 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 METRNLQ641Q3 311 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ACSM2BQ68CK6 577 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ARL9Q6T311 187 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 TMPPEQ6ZT21 453 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 MRPL21Q7Z2W9 205 aaKnown RBP3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ACOT1Q86TX2 421 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 BOLLQ8N9W6 283 aaKnown RBP3.77□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM170AQ8WVE7 144 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM56Q96MV1 263 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 MAP1LC3BQ9GZQ8 125 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 GPR35Q9HC97 309 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 CLN8Q9UBY8 286 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 COX11Q9Y6N1 276 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM56-RWDD3S4R434 201 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 A0A0G2JN53 185 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 A0A0U1RQK1 487 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF320A2RRD8 509 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF716A6NP11 495 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 PYCARD-AS1I3L0S3 204 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 F12P00748 615 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-201ENST00000338963 IFNA5P01569 189 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF735P0CB33 412 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 FAM157CP0CG43 387 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 DPP4P27487 766 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 AQP2P41181 271 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 GRK6P43250 576 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 HGFACQ04756 655 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ZP2Q05996 745 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ENDOGQ14249 297 aaKnown RBP3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ACSM3Q53FZ2 586 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF789Q5FWF6 425 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ENTPD8Q5MY95 495 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 NXPE4Q6UWF7 544 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 GKN2Q86XP6 184 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 TCEAL8Q8IYN2 117 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 NECAP1Q8NC96 275 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 LYPD6BQ8NI32 183 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 MRGPRFQ96AM1 343 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 GPR20Q99678 358 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 RAB33BQ9H082 229 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 OBP2AQ9NY56 170 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 UBR1Q8IWV7 1749 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 IGKV6D-41A0A0C4DH26 115 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 IGHV1-69-2A0A0G2JMI3 117 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 NKX2-6A6NCS4 301 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 A6NNC1 897 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ARPC3O15145 178 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 SLC16A8O95907 504 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 TRGC2P03986 189 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 SMIM10L2AP0DMW4 78 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 SMIM10L2BP0DMW5 78 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 VSIG10L2P0DP72 767 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 EDNRBP24530 442 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 TAS2R20P59543 309 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 FAM71F2Q6NXP2 309 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 SLCO4C1Q6ZQN7 724 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 MBOAT2Q6ZWT7 520 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 CHST4Q8NCG5 386 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ACVR1CQ8NER5 493 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 NOXO1Q8NFA2 376 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 LGALS14Q8TCE9 139 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 PPP1R1CQ8WVI7 109 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 FRZBQ92765 325 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 APH1AQ96BI3 265 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 190.2 ms