RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 MIXL1Q9H2W2 232 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 FSCN3Q9NQT6 498 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 SLC17A2O00624 439 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 TPD52L2O43399 206 aaKnown RBP5.68□□□□□ -1.5
PRKDC-202ENST00000338368 PTP4A3O75365 173 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 DOC2BQ14184 412 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 PXKQ7Z7A4 578 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 AICDAQ9GZX7 198 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 METTL17Q9H7H0 456 aaPredicted RBP5.68□□□□□ -1.5
PRKDC-202ENST00000338368 LOC100289279A0A1B0GTE1 492 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 TCRBV16S1A1N1A0A5B0 115 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 KLRC4-KLRK1H3BQV0 150 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 HOXD12P35452 270 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 PMPCAQ10713 525 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 RTL6Q6ICC9 239 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 OR10K2Q6IF99 312 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 PPA2Q9H2U2 334 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 CALHM2Q9HA72 323 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 TAS2R4Q9NYW5 299 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 LRFN1Q9P244 771 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 PLEKHB1Q9UF11 243 aaPredicted RBP5.68□□□□□ -1.5
PRKDC-202ENST00000338368 LSM2Q9Y333 95 aaKnown RBP5.68□□□□□ -1.5
PRKDC-202ENST00000338368 PCNX1Q96RV3 2341 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 BPNT1O95861 308 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 TGFBR3Q03167 851 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 FAM198BQ6UWH4 519 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 OR4K15Q8NH41 348 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 MIB2Q96AX9 1013 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 TSPAN32Q96QS1 320 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 BARHL1Q9BZE3 327 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 A0A1W2PR77 199 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 ISXQ2M1V0 245 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 CDONQ4KMG0 1287 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 MESTQ5EB52 335 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 SLC25A45Q8N413 288 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 C11orf40Q8WZ69 217 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 DUSP15Q9H1R2 295 aaPredicted RBP5.68□□□□□ -1.5
PRKDC-202ENST00000338368 V9GYH0 126 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 A0A1B0GTQ1 180 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 FXYD4P59646 89 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 FMODQ06828 376 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 AIMP2Q13155 320 aaKnown RBP5.67□□□□□ -1.5
PRKDC-202ENST00000338368 MFFQ9GZY8 342 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 ANKRD33BA6NCL7 494 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 SGCEO43556 437 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 ALOX5APP20292 161 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 GNRHRP30968 328 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 DEFA5Q01523 94 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 ZNF658BQ4V348 819 aaPredicted RBP5.67□□□□□ -1.5
PRKDC-202ENST00000338368 MKXQ8IYA7 352 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 DND1Q8IYX4 353 aaKnown RBP5.67□□□□□ -1.5
PRKDC-202ENST00000338368 OR4D9Q8NGE8 314 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 ZNF768Q9H5H4 540 aaKnown RBP5.67□□□□□ -1.5
PRKDC-202ENST00000338368 CDH20Q9HBT6 801 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 HDGFL3Q9Y3E1 203 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 KIR2DL3P43628 341 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 IL13RA1P78552 427 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 DMKNQ6E0U4 476 aaPredicted RBP5.67□□□□□ -1.5
PRKDC-202ENST00000338368 SGPP2Q8IWX5 399 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 COLQQ9Y215 455 aaPredicted RBP5.67□□□□□ -1.5
PRKDC-202ENST00000338368 DIRAS3O95661 229 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 IGHV3-9P01782 118 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 ACAA2P42765 397 aaKnown RBP5.67□□□□□ -1.5
PRKDC-202ENST00000338368 ACSM1Q08AH1 577 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 IL11RAQ14626 422 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 GLIPR1L1Q6UWM5 242 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 WDR88Q6ZMY6 472 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 GALNT11Q8NCW6 608 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 CPT1CQ8TCG5 803 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 C4orf45Q96LM5 186 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 FYTTD1Q96QD9 318 aaKnown RBP5.67□□□□□ -1.5
PRKDC-202ENST00000338368 TAS2R3Q9NYW6 316 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 UBE2J1Q9Y385 318 aaPredicted RBP5.67□□□□□ -1.5
PRKDC-202ENST00000338368 A0A087WZY1 265 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 CCL4P13236 92 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 DOK3Q7L591 496 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 NECAB3Q96P71 396 aaPredicted RBP5.67□□□□□ -1.5
PRKDC-202ENST00000338368 PTTG3PQ9NZH4 202 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 KCNN3Q9UGI6 736 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 RAB22AQ9UL26 194 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 WASF3Q9UPY6 502 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 DVL2O14641 736 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 ATF1P18846 271 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 GABRR1P24046 479 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 SLC25A1P53007 311 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 C1QL3Q5VWW1 255 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 TMEM178AQ8NBL3 297 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 AUNIPQ9H7T9 357 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 QPCTLQ9NXS2 382 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 MN1Q10571 1320 aaPredicted RBP5.67□□□□□ -1.5
PRKDC-202ENST00000338368 A0A1W2PPC1 479 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 H7C417 338 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 EPPINO95925 133 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 ITGB2P05107 769 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 INHBBP09529 407 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 BLVRBP30043 206 aaPredicted RBP5.67□□□□□ -1.5
PRKDC-202ENST00000338368 RAP2BP61225 183 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 GRB2P62993 217 aaKnown RBP5.67□□□□□ -1.5
PRKDC-202ENST00000338368 C1orf210Q8IVY1 113 aa5.67□□□□□ -1.5
PRKDC-202ENST00000338368 TWSG1Q9GZX9 223 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms