RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 KCTD14Q9BQ13 255 aaPredicted RBP9.03□□□□□ -0.96
CAPN3-202ENST00000337571 TMPRSS13Q9BYE2 586 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 ANKRD19PQ9H560 264 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 NMNAT1Q9HAN9 279 aaPredicted RBP9.03□□□□□ -0.96
CAPN3-202ENST00000337571 PGPEP1Q9NXJ5 209 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 PLEK2Q9NYT0 353 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 RPS6KA6Q9UK32 745 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 AURKCQ9UQB9 309 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 ADAM18Q9Y3Q7 739 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 DYSFO75923 2080 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 TEX13CA0A0J9YWL9 993 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 SLC16A7O60669 478 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 KHDRBS3O75525 346 aaKnown RBP9.02□□□□□ -0.97
CAPN3-202ENST00000337571 NDUFB2O95178 105 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 H1F0P07305 194 aaKnown RBP9.02□□□□□ -0.97
CAPN3-202ENST00000337571 ADRA2CP18825 462 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 CFPP27918 469 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 SDHAP31040 664 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 CENPAP49450 140 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 SLC7A2P52569 658 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 GYS2P54840 703 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 LSM6P62312 80 aaKnown RBP9.02□□□□□ -0.97
CAPN3-202ENST00000337571 AQP6Q13520 282 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 FGD3Q5JSP0 725 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 GPR139Q6DWJ6 353 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 SLC27A4Q6P1M0 643 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 C1orf229Q6ZS94 237 aaPredicted RBP9.02□□□□□ -0.97
CAPN3-202ENST00000337571 LINC00528Q8N1L1 170 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 SPICQ8N5J4 248 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 ATG16L2Q8NAA4 619 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 SEMA6DQ8NFY4 1073 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 HAVCR1Q96D42 359 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 FAM46AQ96IP4 442 aaKnown RBP9.02□□□□□ -0.97
CAPN3-202ENST00000337571 SAMD8Q96LT4 415 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 NTN4Q9HB63 628 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 DDX28Q9NUL7 540 aaKnown RBP9.02□□□□□ -0.97
CAPN3-202ENST00000337571 TMEM106BQ9NUM4 274 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 IL19Q9UHD0 177 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 EGFL7Q9UHF1 273 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 PURGQ9UJV8 347 aaKnown RBP9.02□□□□□ -0.97
CAPN3-202ENST00000337571 PPP1R3CQ9UQK1 317 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 ENPP4Q9Y6X5 453 aa9.02□□□□□ -0.97
CAPN3-202ENST00000337571 PPIAL4EA0A075B759 164 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 PPIAL4CA0A0B4J2A2 164 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 PPIAL4DF5H284 164 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 NME4O00746 187 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 CDC42EP2O14613 210 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 PRSS23O95084 383 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 SCG5P05408 212 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 PPIAL4FP0DN26 164 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 RHCEP18577 417 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 KITLGP21583 273 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 FUT4P22083 530 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 GSK3BP49841 420 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 NUDT2P50583 147 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 RPS6KA3P51812 740 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 KRR1Q13601 381 aaKnown RBP9.01□□□□□ -0.97
CAPN3-202ENST00000337571 FHL1Q13642 323 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 MESTQ5EB52 335 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 TMEM255AQ5JRV8 349 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 DNM1P34Q6PK57 102 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 FAM156AQ8NDB6 213 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 GJC3Q8NFK1 279 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 OR1F12Q8NHA8 337 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 CMTM5Q96DZ9 223 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 ZMYND19Q96E35 227 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-202ENST00000337571 MRI1Q9BV20 369 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 SYT4Q9H2B2 425 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 MED4Q9NPJ6 270 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 ASH2LQ9UBL3 628 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 COA3Q9Y2R0 106 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-202ENST00000337571 POLR1DQ9Y2S0 133 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 STARD10Q9Y365 291 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 IER3IP1Q9Y5U9 82 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 TANC2Q9HCD6 1990 aa9.01□□□□□ -0.97
CAPN3-202ENST00000337571 NBEAL1Q6ZS30 2694 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 A0A1W2PRQ8 180 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 TMEM89A2RUT3 159 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 OR6C6A6NF89 314 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 J3QW42 95 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 IFNL4K9M1U5 179 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 SOCS2O14508 198 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 PTP4A3O75365 173 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 RAC2P15153 192 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 NCK1P16333 377 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 CTLA4P16410 223 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 CRABP1P29762 137 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 RGS6P49758 472 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 SMIM11AP58511 58 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 BTG1P62324 171 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 CBX1P83916 185 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 DGCR6Q14129 220 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 TMEM155Q4W5P6 130 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 ARMCX4Q5H9R4 360 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 GLYATQ6IB77 296 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 PGM2L1Q6PCE3 622 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 HACD2Q6Y1H2 254 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 DPY19L2P2Q6ZN68 376 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 FAM122BQ7Z309 247 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 ADCK1Q86TW2 530 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms