RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 THBS1P07996 1170 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 NMBP08949 121 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 GIPP09681 153 aaPredicted RBP5.86□□□□□ -1.47
HMG20A-201ENST00000336216 TMIGD3P0DMS9 266 aaPredicted RBP5.86□□□□□ -1.47
HMG20A-201ENST00000336216 GLB1P16278 677 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 HTR2AP28223 471 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 PPICP45877 212 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 CLDN6P56747 220 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 PSG6Q00889 435 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 FMODQ06828 376 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 RBMS2Q15434 407 aaKnown RBP5.86□□□□□ -1.47
HMG20A-201ENST00000336216 ETFDHQ16134 617 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 PRICKLE4Q2TBC4 344 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 CHRFAM7AQ494W8 412 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 TMEM255AQ5JRV8 349 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 B3GNTL1Q67FW5 361 aaPredicted RBP5.86□□□□□ -1.47
HMG20A-201ENST00000336216 LRRTM1Q86UE6 522 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 RPS19BP1Q86WX3 136 aaKnown RBP5.86□□□□□ -1.47
HMG20A-201ENST00000336216 ARIH2OSQ8N7S6 290 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 CLRN3Q8NCR9 226 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 OR51T1Q8NGJ9 327 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 PTP4A1Q93096 173 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 MIB2Q96AX9 1013 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 ZNF75AQ96N20 296 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 BANF2Q9H503 90 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 APMAPQ9HDC9 416 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 SIGLEC7Q9Y286 467 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 PCDHGA1Q9Y5H4 931 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 FNDC1Q4ZHG4 1894 aaPredicted RBP5.86□□□□□ -1.47
HMG20A-201ENST00000336216 TRAV36DV7A0A075B6V5 113 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 RPS10-NUDT3A0A1W2PQS6 291 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 OR6C68A6NDL8 312 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 NAP1L6A6NFF2 107 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 IFITM5A6NNB3 132 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 A8MVM7 634 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 GABARAPH6UMI1 98 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 SYNGR4O95473 234 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 CD3DP04234 171 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 ZNF14P17017 642 aaPredicted RBP5.86□□□□□ -1.47
HMG20A-201ENST00000336216 MSX1P28360 303 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 CDAP32320 146 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 P2RX1P51575 399 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 TAS2R20P59543 309 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 CD226Q15762 336 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 FAM76BQ5HYJ3 339 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 PDSS1Q5T2R2 415 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 H3F3CQ6NXT2 135 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 BAIAP2L2Q6UXY1 529 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 SLC22A18ASQ8N1D0 253 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 CNEP1R1Q8N9A8 125 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 SMRP1Q8NCR6 262 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 OR2AK2Q8NG84 335 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 OR4C16Q8NGL9 310 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 PELI1Q96FA3 418 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 GDF15Q99988 308 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 VN1R1Q9GZP7 353 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 MED17Q9NVC6 651 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 SLC5A6Q9Y289 635 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 B3GALT1Q9Y5Z6 326 aa5.86□□□□□ -1.47
HMG20A-201ENST00000336216 TRAV20A0A0B4J274 112 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 ZNF736B4DX44 427 aaPredicted RBP5.85□□□□□ -1.47
HMG20A-201ENST00000336216 FBXO24O75426 580 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 MPZL1O95297 269 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 IGHV4-34P06331 123 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 NME1P15531 152 aaKnown RBP5.85□□□□□ -1.47
HMG20A-201ENST00000336216 ABCD3P28288 659 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 POLR2HP52434 150 aaKnown RBP5.85□□□□□ -1.47
HMG20A-201ENST00000336216 ZP1P60852 638 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 CSNK2A1P68400 391 aaPredicted RBP5.85□□□□□ -1.47
HMG20A-201ENST00000336216 SMAD4Q13485 552 aaKnown RBP5.85□□□□□ -1.47
HMG20A-201ENST00000336216 FAM53BQ14153 422 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 HNF4GQ14541 408 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 MUC20Q8N307 709 aaPredicted RBP5.85□□□□□ -1.47
HMG20A-201ENST00000336216 SPEM1Q8N4L4 309 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 CSNK2A3Q8NEV1 391 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 OR1J4Q8NGS1 313 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 IFI44Q8TCB0 444 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 GPBAR1Q8TDU6 330 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 PIGCQ92535 297 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 DCUN1D4Q92564 292 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 PIGTQ969N2 578 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 CALHM2Q9HA72 323 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 KIF25Q9UIL4 384 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 MTCH2Q9Y6C9 303 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 PIEZO2Q9H5I5 2752 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 PRUNE2Q8WUY3 3088 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 IGHV1OR21-1A0A087WYE8 117 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 TMEM82A0PJX8 343 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 A6NCN8 305 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 MASP2O00187 686 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 MTRF1O75570 445 aaKnown RBP5.85□□□□□ -1.47
HMG20A-201ENST00000336216 IGHG1P01857 330 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 GUSBP08236 651 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 AKAIN1P0CW23 69 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 DAP3P51398 398 aaKnown RBP5.85□□□□□ -1.47
HMG20A-201ENST00000336216 CCR5P51681 352 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 RPS18P62269 152 aaKnown RBP5.85□□□□□ -1.47
HMG20A-201ENST00000336216 ALKBH1Q13686 389 aaKnown RBP5.85□□□□□ -1.47
HMG20A-201ENST00000336216 CDK5R1Q15078 307 aa5.85□□□□□ -1.47
HMG20A-201ENST00000336216 RSU1Q15404 277 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms