RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 Q5PR19 223 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 SYT9Q86SS6 491 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 OR6F1Q8NGZ6 308 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 FNDC9Q8TBE3 224 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 RRNAD1Q96FB5 475 aaKnown RBP6.17□□□□□ -1.42
SF3B1-201ENST00000335508 C14orf119Q9NWQ9 140 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 FLRT3Q9NZU0 649 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 FUT4P22083 530 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 TAS2R19P59542 299 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 CXADRP78310 365 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 NPSR1Q6W5P4 371 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 ADGRG3Q86Y34 549 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 ARMC10Q8N2F6 343 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 THAP6Q8TBB0 222 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 CMTM3Q96MX0 182 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 DNTTIP1Q9H147 329 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 SCN3AQ9NY46 2000 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 FADS1O60427 444 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 DXOO77932 396 aaKnown RBP6.17□□□□□ -1.42
SF3B1-201ENST00000335508 CLUP10909 449 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 PSMB1P20618 241 aaKnown RBP6.17□□□□□ -1.42
SF3B1-201ENST00000335508 NKPD1Q17RQ9 610 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 SCGB2B2Q4G0G5 96 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 THSD4Q6ZMP0 1018 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 FAM57BQ71RH2 274 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 TMED4Q7Z7H5 227 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 ZAR1Q86SH2 424 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 OR56B4Q8NH76 319 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 ZNF845Q96IR2 970 aaPredicted RBP6.17□□□□□ -1.42
SF3B1-201ENST00000335508 OPALINQ96PE5 141 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 OR14A2Q96R54 314 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 PLA2G12AQ9BZM1 189 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 MED20Q9H944 212 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 ZNF222Q9UK12 451 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 RAB22AQ9UL26 194 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 MCRIP1C9JLW8 97 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 TXNDC12O95881 172 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 CRHP06850 196 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 YES1P07947 543 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 CALCBP10092 127 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 STARP49675 285 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 CENPSQ8N2Z9 138 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 ARHGEF39Q8N4T4 335 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 CCDC71LQ8N9Z2 235 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 APCDD1LQ8NCL9 501 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 OR51A2Q8NGJ7 313 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 OR10D3Q8NH80 312 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 KISS1RQ969F8 398 aaPredicted RBP6.17□□□□□ -1.42
SF3B1-201ENST00000335508 PELI1Q96FA3 418 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 IMMP1LQ96LU5 166 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 TSSK2Q96PF2 358 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 ALKBH3Q96Q83 286 aaPredicted RBP6.17□□□□□ -1.42
SF3B1-201ENST00000335508 NRTNQ99748 197 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 MED18Q9BUE0 208 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 C20orf141Q9NUB4 165 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 AQP7P3A6NL99 342 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 CDC42EP2O14613 210 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 SMPD2O60906 423 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 IL7P13232 177 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 LIFP15018 202 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 TBPP20226 339 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 FZD5Q13467 585 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 TBC1D28Q2M2D7 210 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 PPP1R32Q7Z5V6 425 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 LACC1Q8IV20 430 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 LINC00346Q8IVM7 164 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 ASB5Q8WWX0 329 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 PDCD1LG2Q9BQ51 273 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 ADAM19Q9H013 955 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 HIVEP3Q5T1R4 2406 aa6.17□□□□□ -1.42
SF3B1-201ENST00000335508 A0A1W2PS29 197 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 CRTAPO75718 401 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-201ENST00000335508 PMS2P2O95744 297 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 F10P00742 488 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 AMY2AP04746 511 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 CTXN2P0C2S0 81 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 ACAA2P42765 397 aaKnown RBP6.16□□□□□ -1.42
SF3B1-201ENST00000335508 ZFP36L2P47974 494 aaKnown RBP6.16□□□□□ -1.42
SF3B1-201ENST00000335508 SPOCK1Q08629 439 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 KRTCAP3Q53RY4 240 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 LPCAT3Q6P1A2 487 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 ADGRE4PQ86SQ3 457 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 SLC7A5P1Q8MH63 180 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 FAM71CQ8NEG0 241 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 SEMA6DQ8NFY4 1073 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 OR51D1Q8NGF3 324 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 MRPS24Q96EL2 167 aaKnown RBP6.16□□□□□ -1.42
SF3B1-201ENST00000335508 MBOAT4Q96T53 435 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 SELENOIQ9C0D9 397 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 MRPS18AQ9NVS2 196 aaKnown RBP6.16□□□□□ -1.42
SF3B1-201ENST00000335508 R4GMQ9 66 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 PSMD9O00233 223 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 SP1P08047 785 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 TUBG1P23258 451 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 STOMP27105 288 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 OPRM1P35372 400 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 FXYD6P3P58550 94 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 IGSF11Q5DX21 431 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 ZNF554Q86TJ5 538 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 SERPINA12Q8IW75 414 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms