RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 KLHL22Q53GT1 634 aa15.2■□□□□ 0.02
CHGA-202ENST00000334654 ELFN2Q5R3F8 820 aa15.2■□□□□ 0.02
CHGA-202ENST00000334654 ALKBH2Q6NS38 261 aa15.2■□□□□ 0.02
CHGA-202ENST00000334654 TMEM154Q6P9G4 183 aa15.2■□□□□ 0.02
CHGA-202ENST00000334654 SSX8Q7RTT4 187 aa15.2■□□□□ 0.02
CHGA-202ENST00000334654 ZNF454Q8N9F8 522 aa15.2■□□□□ 0.02
CHGA-202ENST00000334654 OR2T27Q8NH04 317 aa15.2■□□□□ 0.02
CHGA-202ENST00000334654 RNF133Q8WVZ7 376 aa15.2■□□□□ 0.02
CHGA-202ENST00000334654 SGCDQ92629 289 aa15.2■□□□□ 0.02
CHGA-202ENST00000334654 C1orf198Q9H425 327 aa15.2■□□□□ 0.02
CHGA-202ENST00000334654 CNOT2Q9NZN8 540 aaKnown RBP15.2■□□□□ 0.02
CHGA-202ENST00000334654 PTPN13Q12923 2485 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 ROS1P08922 2347 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 A0A1W2PQL4 384 aaPredicted RBP15.19■□□□□ 0.02
CHGA-202ENST00000334654 DPRXA6NFQ7 191 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 FAM20BO75063 409 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 RAB36O95755 333 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 LYNP07948 512 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 CECR9P0C854 216 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 EPXP11678 715 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 APEX1P27695 318 aaKnown RBP15.19■□□□□ 0.02
CHGA-202ENST00000334654 ATP6V1E1P36543 226 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 IDH3GP51553 393 aaPredicted RBP15.19■□□□□ 0.02
CHGA-202ENST00000334654 ZNF85Q03923 595 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 RAB35Q15286 201 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 KRTAP27-1Q3LI81 207 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 ZNF684Q5T5D7 378 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 MEX3BQ6ZN04 569 aaKnown RBP15.19■□□□□ 0.02
CHGA-202ENST00000334654 THEM6Q8WUY1 208 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 SLAMF6Q96DU3 332 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 POM121L2Q96KW2 1035 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 MNTQ99583 582 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 TBX5Q99593 518 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 SPOCK3Q9BQ16 436 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 DUSP21Q9H596 190 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 DDX28Q9NUL7 540 aaKnown RBP15.19■□□□□ 0.02
CHGA-202ENST00000334654 PLEK2Q9NYT0 353 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 LAMP5Q9UJQ1 280 aa15.19■□□□□ 0.02
CHGA-202ENST00000334654 MAGEA13PA6NCF6 341 aa15.18■□□□□ 0.02
CHGA-202ENST00000334654 DOK2O60496 412 aa15.18■□□□□ 0.02
CHGA-202ENST00000334654 FADS2O95864 444 aaKnown RBP15.18■□□□□ 0.02
CHGA-202ENST00000334654 COX5BP10606 129 aa15.18■□□□□ 0.02
CHGA-202ENST00000334654 LOXP28300 417 aaPredicted RBP15.18■□□□□ 0.02
CHGA-202ENST00000334654 SLC35A2P78381 396 aa15.18■□□□□ 0.02
CHGA-202ENST00000334654 ST3GAL4Q11206 333 aa15.18■□□□□ 0.02
CHGA-202ENST00000334654 RBM48Q5RL73 367 aaKnown RBP15.18■□□□□ 0.02
CHGA-202ENST00000334654 SP5Q6BEB4 398 aaPredicted RBP15.18■□□□□ 0.02
CHGA-202ENST00000334654 RHOUQ7L0Q8 258 aa15.18■□□□□ 0.02
CHGA-202ENST00000334654 ZNF786Q8N393 782 aa15.18■□□□□ 0.02
CHGA-202ENST00000334654 OR10H4Q8NGA5 316 aa15.18■□□□□ 0.02
CHGA-202ENST00000334654 OR1F12Q8NHA8 337 aa15.18■□□□□ 0.02
CHGA-202ENST00000334654 SLC7A6Q92536 515 aa15.18■□□□□ 0.02
CHGA-202ENST00000334654 SIGLEC11Q96RL6 698 aa15.18■□□□□ 0.02
CHGA-202ENST00000334654 JAM3Q9BX67 310 aa15.18■□□□□ 0.02
CHGA-202ENST00000334654 YTHDF1Q9BYJ9 559 aaKnown RBP15.18■□□□□ 0.02
CHGA-202ENST00000334654 MOV10Q9HCE1 1003 aaKnown RBP15.18■□□□□ 0.02
CHGA-202ENST00000334654 PCDHGB1Q9Y5G3 927 aa15.18■□□□□ 0.02
CHGA-202ENST00000334654 TMEM14AQ9Y6G1 99 aa15.18■□□□□ 0.02
CHGA-202ENST00000334654 PLCE1Q9P212 2302 aa15.18■□□□□ 0.02
CHGA-202ENST00000334654 DCHS2Q6V1P9 2916 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 HRNRQ86YZ3 2850 aaPredicted RBP15.17■□□□□ 0.02
CHGA-202ENST00000334654 EFCAB10A6NFE3 127 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 DEFB108AA8MXU0 73 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 M0R1B8 84 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 MAGEB4O15481 346 aaPredicted RBP15.17■□□□□ 0.02
CHGA-202ENST00000334654 CCL2P13500 99 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 DCKP27707 260 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 OTX1P32242 354 aaPredicted RBP15.17■□□□□ 0.02
CHGA-202ENST00000334654 OPRL1P41146 370 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 ROM1Q03395 351 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 AHSA2Q719I0 299 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 ALDH16A1Q8IZ83 802 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 PAQR4Q8N4S7 273 aaPredicted RBP15.17■□□□□ 0.02
CHGA-202ENST00000334654 ACBD7Q8N6N7 88 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 ZNF540Q8NDQ6 660 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 FAM222BQ8WU58 562 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 COQ7Q99807 217 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 TTTY10Q9BZA0 68 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 HDHD2Q9H0R4 259 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 SLCO1C1Q9NYB5 712 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 ATPIF1Q9UII2 106 aa15.17■□□□□ 0.02
CHGA-202ENST00000334654 DIMT1Q9UNQ2 313 aaKnown RBP15.17■□□□□ 0.02
CHGA-202ENST00000334654 IQCMA0A1B0GVH7 501 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 PTGES3LE9PB15 166 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 ZNF670-ZNF695F2Z2N8 137 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 DBHP09172 617 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 LIMS3P0CW19 117 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 LIMS4P0CW20 117 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 ZNF35P13682 527 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 CD40P25942 277 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 STOMP27105 288 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 C21orf33P30042 268 aaPredicted RBP15.16■□□□□ 0.02
CHGA-202ENST00000334654 CALCRP30988 508 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 HGFACQ04756 655 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 PLP2Q04941 152 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 NCMAPQ5T1S8 102 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 ZNF322Q6U7Q0 402 aaPredicted RBP15.16■□□□□ 0.02
CHGA-202ENST00000334654 SPATC1Q76KD6 591 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 LHFPL3Q86UP9 236 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 ASB17Q8WXJ9 295 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms