RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 ERVK-16P61578 105 aa11.77□□□□□ -0.53
VSTM4-202ENST00000332853 HNF4GQ14541 408 aa11.77□□□□□ -0.53
VSTM4-202ENST00000332853 ACTBL2Q562R1 376 aa11.77□□□□□ -0.53
VSTM4-202ENST00000332853 KANSL1Q7Z3B3 1105 aa11.77□□□□□ -0.53
VSTM4-202ENST00000332853 ZNF321PQ8N8H1 164 aa11.77□□□□□ -0.53
VSTM4-202ENST00000332853 OR2G2Q8NGZ5 317 aa11.77□□□□□ -0.53
VSTM4-202ENST00000332853 MAFIPQ8WZ33 124 aa11.77□□□□□ -0.53
VSTM4-202ENST00000332853 ANKRD9Q96BM1 317 aaPredicted RBP11.77□□□□□ -0.53
VSTM4-202ENST00000332853 ZC3HAV1LQ96H79 300 aaKnown RBP11.77□□□□□ -0.53
VSTM4-202ENST00000332853 TRBV5-3A0A0A0MS03 114 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 ATG12O94817 140 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 NFYAP23511 347 aaPredicted RBP11.76□□□□□ -0.53
VSTM4-202ENST00000332853 MAGEB1P43366 347 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 CLDN15P56746 228 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 FMODQ06828 376 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 SSX1Q16384 188 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 OR52N5Q8NH56 324 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 R4GMQ9 66 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 EPOPA6NHQ4 379 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 LILRB5O75023 590 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 ITGB2P05107 769 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 TPOP07202 933 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 BDH1Q02338 343 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 AADACL3Q5VUY0 350 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 TMPRSS11FQ6ZWK6 438 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 ANKRD37Q7Z713 158 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 SDSLQ96GA7 329 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 GNRHR2Q96P88 292 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 PTDSS2Q9BVG9 487 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 MFRPQ9BY79 579 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 ZFC3H1O60293 1989 aaKnown RBP11.76□□□□□ -0.53
VSTM4-202ENST00000332853 GPR171O14626 319 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 SPACA9Q96E40 222 aaPredicted RBP11.76□□□□□ -0.53
VSTM4-202ENST00000332853 SNX18Q96RF0 628 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 PBDC1Q9BVG4 233 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 GON7Q9BXV9 100 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 SLIRPQ9GZT3 109 aaKnown RBP11.76□□□□□ -0.53
VSTM4-202ENST00000332853 MMP25Q9NPA2 562 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 GDF2Q9UK05 429 aaPredicted RBP11.76□□□□□ -0.53
VSTM4-202ENST00000332853 ANKRD33BA6NCL7 494 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 SHISA7A6NL88 538 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 NXPH2O95156 264 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 SLC34A2O95436 690 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 RAD52P43351 418 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 LSM11P83369 360 aaKnown RBP eCLIP11.76□□□□□ -0.53
VSTM4-202ENST00000332853 ABI3BPQ7Z7G0 1075 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 SMRP1Q8NCR6 262 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 PPP1R35Q8TAP8 253 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 TCEAL3Q969E4 200 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 ARL5BQ96KC2 179 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 ABHD6Q9BV23 337 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 EDEM2Q9BV94 578 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 FAM234AQ9H0X4 552 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 PSME4Q14997 1843 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 M0R135 149 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 SULT1B1O43704 296 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 FADS1O60427 444 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 LPLP06858 475 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 ZNF14P17017 642 aaPredicted RBP11.76□□□□□ -0.53
VSTM4-202ENST00000332853 CRYBB2P43320 205 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 SLC16A12Q6ZSM3 486 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 SLC7A6Q92536 515 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 ZNF799Q96GE5 643 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 OCSTAMPQ9BR26 566 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 MTCH2Q9Y6C9 303 aa11.76□□□□□ -0.53
VSTM4-202ENST00000332853 A0A1B0GTH9 108 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 C5orf49A4QMS7 147 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 OR6C68A6NDL8 312 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 HMGA2P52926 109 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 ERVMER34-1Q9H9K5 563 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 ZFP57Q9NU63 452 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 ZNF728P0DKX0 622 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 B4GALT1P15291 398 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 PLGLAQ15195 96 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 RHOUQ7L0Q8 258 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 B3GALT5Q9Y2C3 310 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 MYOFQ9NZM1 2061 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 ZNF121P58317 390 aaPredicted RBP11.75□□□□□ -0.53
VSTM4-202ENST00000332853 EBPQ15125 230 aaKnown RBP11.75□□□□□ -0.53
VSTM4-202ENST00000332853 OR5H6Q8NGV6 325 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 TRIB1Q96RU8 372 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 MENTQ9BUN1 341 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 ZCCHC4Q9H5U6 513 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.75□□□□□ -0.53
VSTM4-202ENST00000332853 C1orf123Q9NWV4 160 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 PLA2G3Q9NZ20 509 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 FAM221AA4D161 298 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 CD53P19397 219 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 MYBPHQ13203 477 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 TBC1D28Q2M2D7 210 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 PWWP2BQ6NUJ5 590 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 JAM3Q9BX67 310 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 PHF1O43189 567 aaPredicted RBP11.75□□□□□ -0.53
VSTM4-202ENST00000332853 RAF1P04049 648 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 GLI4P10075 376 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 EPXP11678 715 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 TOMM34Q15785 309 aaPredicted RBP11.75□□□□□ -0.53
VSTM4-202ENST00000332853 CLVS2Q5SYC1 327 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 WDR88Q6ZMY6 472 aa11.75□□□□□ -0.53
VSTM4-202ENST00000332853 LHX6Q9UPM6 363 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms