RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 RAB2AP61019 212 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 CYCSP99999 105 aaKnown RBP11.49□□□□□ -0.57
CCDC60-201ENST00000327554 ZNF77Q15935 545 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 HSPB2Q16082 182 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 ZNF550Q7Z398 422 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 KDF1Q8NAX2 398 aaPredicted RBP11.49□□□□□ -0.57
CCDC60-201ENST00000327554 OR4N2Q8NGD1 307 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 OR8D1Q8WZ84 308 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 ZNF558Q96NG5 402 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 MAP3K3Q99759 626 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 CMKLR1Q99788 373 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 TAS2R4Q9NYW5 299 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 ZNF860A6NHJ4 632 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 GPR37O15354 613 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 PNPP00491 289 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 C8AP07357 584 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 OR8U9P0C7N5 309 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 RNF224P0DH78 156 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 DAOP14920 347 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 IGFBP3P17936 291 aaPredicted RBP11.48□□□□□ -0.57
CCDC60-201ENST00000327554 OR2B8PP59922 312 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 CTXN1P60606 82 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 HMGN3Q15651 99 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 ZNF260Q3ZCT1 412 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 RPL7L1Q6DKI1 246 aaKnown RBP11.48□□□□□ -0.57
CCDC60-201ENST00000327554 FCRL6Q6DN72 434 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 TRAPPC6BQ86SZ2 158 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 TMEFF1Q8IYR6 380 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 ACBD4Q8NC06 268 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 OR8U1Q8NH10 309 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 ASB17Q8WXJ9 295 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 GTF3AQ92664 365 aaKnown RBP11.48□□□□□ -0.57
CCDC60-201ENST00000327554 HOXB13Q92826 284 aaPredicted RBP11.48□□□□□ -0.57
CCDC60-201ENST00000327554 ZNF587Q96SQ5 575 aaPredicted RBP11.48□□□□□ -0.57
CCDC60-201ENST00000327554 TOLLIPQ9H0E2 274 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 PDE7BQ9NP56 450 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 PARP11Q9NR21 331 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 HIF3AQ9Y2N7 669 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 OR1A2Q9Y585 309 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 HCFC2Q9Y5Z7 792 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 COLEC10Q9Y6Z7 277 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 NOTCH4Q99466 2003 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 CCL16O15467 120 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 B3GALT2O43825 422 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 LY86O95711 162 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 HRH1P35367 487 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 LSSP48449 732 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 GSK3AP49840 483 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 DEFA6Q01524 100 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 ITPRIPL2Q3MIP1 535 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 MESTQ5EB52 335 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 PYY3Q5JQD4 70 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 TEX30Q5JUR7 227 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 ADAM5Q6NVV9 412 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 OR51A2Q8NGJ7 313 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 ASB5Q8WWX0 329 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 ELOVL3Q9HB03 270 aa11.48□□□□□ -0.57
CCDC60-201ENST00000327554 IFITM10A6NMD0 228 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 LILRB3O75022 631 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 MOSPD3O75425 235 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 CSTBP04080 98 aaKnown RBP11.47□□□□□ -0.57
CCDC60-201ENST00000327554 F13BP05160 661 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 P2RY2P41231 377 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 P2RY4P51582 365 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 PSG6Q00889 435 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 OTPQ5XKR4 325 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 CDPF1Q6NVV7 123 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 FAM24BQ8N5W8 94 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 OR51F2Q8NH61 342 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 LYPD6BQ8NI32 183 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 MOGAT1Q96PD6 335 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 OR8B4Q96RC9 309 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 INTS14Q96SY0 518 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 MBNL1Q9NR56 388 aaKnown RBP11.47□□□□□ -0.57
CCDC60-201ENST00000327554 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.47□□□□□ -0.57
CCDC60-201ENST00000327554 DHDHQ9UQ10 334 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 TMEM14AQ9Y6G1 99 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 DCDC2BA2VCK2 349 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 IGLON5A6NGN9 336 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 RHPN2P1A8MT19 583 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 PRRT4C9JH25 899 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 ADAP1O75689 374 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 TXNDC12O95881 172 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 SLC35G6P0C7Q6 338 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 RAB5CP51148 216 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 RPS15AP62244 130 aaKnown RBP11.47□□□□□ -0.57
CCDC60-201ENST00000327554 GPR18Q14330 331 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 SLC17A1Q14916 467 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 HNRNPA1L2Q32P51 320 aaKnown RBP11.47□□□□□ -0.57
CCDC60-201ENST00000327554 ALG10Q5BKT4 473 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 EEF1A1P5Q5VTE0 462 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 DGAT2L6Q6ZPD8 337 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 PPP1R3BQ86XI6 285 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 GKN2Q86XP6 184 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 FAM219AQ8IW50 185 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 OTOSQ8NHW6 89 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 MARCH1Q8TCQ1 289 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 CTHRC1Q96CG8 243 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 CMBLQ96DG6 245 aa11.47□□□□□ -0.57
CCDC60-201ENST00000327554 TM4SF19Q96DZ7 209 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms