RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 MRPS17Q9Y2R5 130 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 AHCTF1Q8WYP5 2266 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 ARPC3O15145 178 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 FBXW4P57775 412 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 ATXN7L3Q14CW9 347 aaPredicted RBP13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 GLB1L2Q8IW92 636 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 OR1M1Q8NGA1 313 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 OR8S1Q8NH09 359 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 TLNRD1Q9H1K6 362 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 MRM2Q9UI43 246 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 HIF3AQ9Y2N7 669 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 MEX3AA1L020 520 aaKnown RBP13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 ZNF879B4DU55 563 aa13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 XKRYO14609 159 aa13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 ZNF354AO60765 605 aaPredicted RBP13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 NPBWR1P48145 328 aa13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 SWI5Q1ZZU3 235 aa13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 FAM122BQ7Z309 247 aa13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 MDGA2Q7Z553 956 aa13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 ZNF440Q8IYI8 595 aa13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 C12orf45Q8N5I9 185 aaPredicted RBP13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 ZNF676Q8N7Q3 588 aa13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 EPHA6Q9UF33 1036 aa13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 FITM1A5D6W6 292 aa13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 FRG2CA6NGY1 282 aa13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 GLSO94925 669 aaPredicted RBP13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 Q7L0L9 218 aa13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 RXFP4Q8TDU9 374 aa13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 MIB2Q96AX9 1013 aa13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 ZNF471Q9BX82 626 aaPredicted RBP13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 ASF1BQ9NVP2 202 aa13.96□□□□□ -0.17
SHROOM1-201ENST00000319854 H3BML4 177 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 SOX1O00570 391 aaPredicted RBP13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 SLC16A7O60669 478 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 RBBP9O75884 186 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 OR6A2O95222 327 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 MPZL1O95297 269 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 SPARCP09486 303 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 ASAH2BP0C7U1 165 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 GP1BBP13224 206 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 NFYBP25208 207 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 EFNB2P52799 333 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 BIVMQ86UB2 503 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 SVBPQ8N300 66 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 STT3BQ8TCJ2 826 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 RNF166Q96A37 237 aaPredicted RBP13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 OR6C1Q96RD1 312 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 NMNAT2Q9BZQ4 307 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 KCNK15Q9H427 330 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 FAM186AA6NE01 2351 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 A0A1B0GX78 115 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 H7C417 338 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 ACTL6AO96019 429 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 FABP1P07148 127 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 HLA-DOBP13765 273 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 CBR1P16152 277 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 DHRS7BQ6IAN0 325 aaPredicted RBP13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 GUSBP11Q6P575 273 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 TMEM71Q6P5X7 295 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 DNM1P46Q6ZS02 220 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 C17orf82Q86X59 251 aaPredicted RBP13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 DND1Q8IYX4 353 aaKnown RBP13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 SYS1Q8N2H4 156 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 OR5AK2Q8NH90 309 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 TMEM231Q9H6L2 316 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 GSN-AS1Q9NRJ2 163 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 FRRS1LQ9P0K9 344 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 MTFP1Q9UDX5 166 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 FBXO4Q9UKT5 387 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 ZNF281Q9Y2X9 895 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 IGKV3D-11A0A0A0MRZ8 115 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 H3BMH7 237 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 CD3DP04234 171 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 GLB1P16278 677 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 COL19A1Q14993 1142 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 ACKR1Q16570 336 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 OGFOD3Q6PK18 319 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 STAC2Q6ZMT1 411 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 TMPRSS12Q86WS5 348 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 CADM4Q8NFZ8 388 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 THAP6Q8TBB0 222 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 SEC22AQ96IW7 307 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 VRK1Q99986 396 aaPredicted RBP13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 POFUT1Q9H488 388 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 TCF7L1Q9HCS4 588 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 APMAPQ9HDC9 416 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 MYEF2Q9P2K5 600 aaKnown RBP13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 MMACHCQ9Y4U1 282 aa13.95□□□□□ -0.18
SHROOM1-201ENST00000319854 BLACEA4D250 179 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 CCSO14618 274 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 SGCEO43556 437 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 NUDT21O43809 227 aaKnown RBP13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 OR2T1O43869 369 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 RENP00797 406 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 RAB40ALP0C0E4 278 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 DCDP81605 110 aaKnown RBP13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 ZNF600Q6ZNG1 722 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 OR6N1Q8NGY5 312 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 RAB40AQ8WXH6 277 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 BCL2L14Q9BZR8 327 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms