RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 PPP1CBP62140 327 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 LCN2P80188 198 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 FMODQ06828 376 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 CDK5R2Q13319 367 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 LAPTM4AQ15012 233 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 SGCAQ16586 387 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 ALG10Q5BKT4 473 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 ZMAT1Q5H9K5 638 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 SHISA2Q6UWI4 295 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 MBOAT2Q6ZWT7 520 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 FNDC8Q8TC99 324 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 ST7LQ8TDW4 575 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 CLPTM1LQ96KA5 538 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 NSMCE2Q96MF7 247 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 C1orf21Q9H246 121 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 MAN2C1Q9NTJ4 1040 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 HIF3AQ9Y2N7 669 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 TIMM10BQ9Y5J6 103 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 NPTNQ9Y639 398 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 EFCAB9A8MZ26 197 aa12□□□□□ -0.49
RPP40-201ENST00000319533 GYG2O15488 501 aa12□□□□□ -0.49
RPP40-201ENST00000319533 GSC2O15499 205 aa12□□□□□ -0.49
RPP40-201ENST00000319533 NGFP01138 241 aa12□□□□□ -0.49
RPP40-201ENST00000319533 IGHMP01871 453 aa12□□□□□ -0.49
RPP40-201ENST00000319533 H1F0P07305 194 aaKnown RBP12□□□□□ -0.49
RPP40-201ENST00000319533 ZNF12P17014 697 aa12□□□□□ -0.49
RPP40-201ENST00000319533 RHCEP18577 417 aa12□□□□□ -0.49
RPP40-201ENST00000319533 PRTN3P24158 256 aa12□□□□□ -0.49
RPP40-201ENST00000319533 SLC9A3P48764 834 aa12□□□□□ -0.49
RPP40-201ENST00000319533 ERVK-25P63136 954 aa12□□□□□ -0.49
RPP40-201ENST00000319533 PRKCDQ05655 676 aa12□□□□□ -0.49
RPP40-201ENST00000319533 ANKDD1AQ495B1 522 aa12□□□□□ -0.49
RPP40-201ENST00000319533 TMEM155Q4W5P6 130 aa12□□□□□ -0.49
RPP40-201ENST00000319533 SYT9Q86SS6 491 aa12□□□□□ -0.49
RPP40-201ENST00000319533 ALDH16A1Q8IZ83 802 aa12□□□□□ -0.49
RPP40-201ENST00000319533 ZNF283Q8N7M2 679 aa12□□□□□ -0.49
RPP40-201ENST00000319533 ABHD4Q8TB40 342 aa12□□□□□ -0.49
RPP40-201ENST00000319533 C22orf15Q8WYQ4 148 aa12□□□□□ -0.49
RPP40-201ENST00000319533 NSMAFQ92636 917 aa12□□□□□ -0.49
RPP40-201ENST00000319533 MCUR1Q96AQ8 359 aa12□□□□□ -0.49
RPP40-201ENST00000319533 PYURFQ96I23 114 aa12□□□□□ -0.49
RPP40-201ENST00000319533 NDEL1Q9GZM8 345 aa12□□□□□ -0.49
RPP40-201ENST00000319533 ZMAT3Q9HA38 289 aaKnown RBP12□□□□□ -0.49
RPP40-201ENST00000319533 NMNAT1Q9HAN9 279 aaPredicted RBP12□□□□□ -0.49
RPP40-201ENST00000319533 ELOVL3Q9HB03 270 aa12□□□□□ -0.49
RPP40-201ENST00000319533 KRCC1Q9NPI7 259 aaPredicted RBP12□□□□□ -0.49
RPP40-201ENST00000319533 MMP26Q9NRE1 261 aa12□□□□□ -0.49
RPP40-201ENST00000319533 DCAF16Q9NXF7 216 aa12□□□□□ -0.49
RPP40-201ENST00000319533 NDUFAF4Q9P032 175 aa12□□□□□ -0.49
RPP40-201ENST00000319533 CD300AQ9UGN4 299 aa12□□□□□ -0.49
RPP40-201ENST00000319533 PURGQ9UJV8 347 aaKnown RBP12□□□□□ -0.49
RPP40-201ENST00000319533 NUP50Q9UKX7 468 aa12□□□□□ -0.49
RPP40-201ENST00000319533 TMEM5Q9Y2B1 443 aa12□□□□□ -0.49
RPP40-201ENST00000319533 PPIAL4AQ9Y536 164 aa12□□□□□ -0.49
RPP40-201ENST00000319533 PCDHGB1Q9Y5G3 927 aa12□□□□□ -0.49
RPP40-201ENST00000319533 V9GYQ6 96 aa12□□□□□ -0.49
RPP40-201ENST00000319533 CMYA5Q8N3K9 4069 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 A0A087WUU8 490 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 A0A1W2PRQ8 180 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 ISPDA4D126 451 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 A8MXK9 166 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 F5H0A9 414 aaPredicted RBP11.99□□□□□ -0.49
RPP40-201ENST00000319533 TRAPPC2LH3BP13 241 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 ARPC2O15144 300 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 TUBG1P23258 451 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 LAP3P28838 519 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 SLC6A9P48067 706 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 RPL27P61353 136 aaKnown RBP11.99□□□□□ -0.49
RPP40-201ENST00000319533 PCBD1P61457 104 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 TNFAIP6P98066 277 aaPredicted RBP11.99□□□□□ -0.49
RPP40-201ENST00000319533 CD47Q08722 323 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 PSG7Q13046 419 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 DGCR6Q14129 220 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 ENDOGQ14249 297 aaKnown RBP11.99□□□□□ -0.49
RPP40-201ENST00000319533 DNAL1Q4LDG9 190 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 MTX3Q5HYI7 312 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 FGD3Q5JSP0 725 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 KLF17Q5JT82 389 aaPredicted RBP11.99□□□□□ -0.49
RPP40-201ENST00000319533 ZER1Q7Z7L7 766 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 OAFQ86UD1 273 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 LRRC28Q86X40 367 aaPredicted RBP11.99□□□□□ -0.49
RPP40-201ENST00000319533 SIGLECL1Q8N7X8 197 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 LRRC75AQ8NAA5 344 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 OR51A7Q8NH64 312 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 C4orf45Q96LM5 186 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 SAMD8Q96LT4 415 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 C1orf147Q96MC9 270 aaPredicted RBP11.99□□□□□ -0.49
RPP40-201ENST00000319533 RBP7Q96R05 134 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 GPA33Q99795 319 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 WACQ9BTA9 647 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 PATZ1Q9HBE1 687 aaKnown RBP11.99□□□□□ -0.49
RPP40-201ENST00000319533 TUBG2Q9NRH3 451 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 TMEM106BQ9NUM4 274 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 PLEK2Q9NYT0 353 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 UBAP1Q9NZ09 502 aa11.99□□□□□ -0.49
RPP40-201ENST00000319533 TRAV27A0A087WT01 109 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 COX5BP10606 129 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 FUT4P22083 530 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 MSX2P35548 267 aaPredicted RBP11.98□□□□□ -0.49
RPP40-201ENST00000319533 RASSF2P50749 326 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms