RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 ZNF615Q8N8J6 731 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 OR4C3Q8NH37 302 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 PTDSS2Q9BVG9 487 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 MKL2Q9ULH7 1088 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 FREM2Q5SZK8 3169 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 IGHV3-20A0A0C4DH32 117 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 RNF222A6NCQ9 220 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 OR14I1A6ND48 311 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 OR4C45A6NMZ5 311 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 BLOC1S5-TXNDC5H3BN57 136 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 ITGA5P08648 1049 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 ADCYAP1P18509 176 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 FBLP22087 321 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 NSDHLQ15738 373 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 ZCCHC12Q6PEW1 402 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 JAZF1Q86VZ6 243 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 GALNT16Q8N428 558 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 DTWD2Q8NBA8 298 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 POTEKPQ9BYX7 375 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 FAM117AQ9C073 453 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 TINAGL1Q9GZM7 467 aaPredicted RBP15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 COMMD4Q9H0A8 199 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 ATG5Q9H1Y0 275 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 SRA1Q9HD15 236 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 SLC22A11Q9NSA0 550 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 COA4Q9NYJ1 87 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 SEMA5BQ9P283 1151 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 NOP16Q9Y3C1 178 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 TRBV5-7A0A0A0MS05 114 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 F8W036 122 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 LINC01387J3KSC0 135 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 ABHD16AO95870 558 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 AMY2AP04746 511 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 CD34P28906 385 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 SCAND1P57086 179 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 SCRN3Q0VDG4 424 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 FUT7Q11130 342 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 ZNF345Q14585 488 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 C2orf76Q3KRA6 126 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 FAM69BQ5VUD6 431 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 UQCC3Q6UW78 93 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 LANCL3Q6ZV70 420 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 OR2G2Q8NGZ5 317 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 UQCC2Q9BRT2 126 aa15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 LMF2Q9BU23 707 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-201ENST00000316097 CDC40O60508 579 aaKnown RBP eCLIP15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 GPR143P51810 404 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 DHRS2Q13268 280 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 RAB12Q6IQ22 244 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 LIN54Q6MZP7 749 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 PRR22Q8IZ63 422 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 GATSQ8NAP1 163 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 IFI44Q8TCB0 444 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 GPR148Q8TDV2 347 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 GPX8Q8TED1 209 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 CCDC74BQ96LY2 380 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 A0A1B0GX78 115 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 F5H0A9 414 aaPredicted RBP15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 AQP2P41181 271 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 ATP1B3P54709 279 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 TAS2R19P59542 299 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 ACTBP60709 375 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 ACTG1P63261 375 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 PHF19Q5T6S3 580 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 BCORP1Q8N888 145 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 PPP1R1CQ8WVI7 109 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 TSEN15Q8WW01 171 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 FAM3DQ96BQ1 224 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 PHYHIPLQ96FC7 376 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 AKIRIN1Q9H9L7 192 aaPredicted RBP15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 LAMP5Q9UJQ1 280 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 FER1L5A0AVI2 2057 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 CACNA1CQ13936 2221 aa15.42■□□□□ 0.06
SCAMP4-201ENST00000316097 A0A1B0GTI1 187 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 H7C1C5 153 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 DCTN6O00399 190 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 ALOX12BO75342 701 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 LCN6P62502 163 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 SCGB2B2Q4G0G5 96 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 ATPAF1Q5TC12 328 aaPredicted RBP15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 TMEM205Q6UW68 189 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 UNQ6126/PRO20091Q6UXV3 157 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 NDUFAF7Q7L592 441 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 ZSCAN1Q8NBB4 408 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 OR6N2Q8NGY6 317 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 ZC3H10Q96K80 434 aaKnown RBP15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 GAL3ST4Q96RP7 486 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 VN1R1Q9GZP7 353 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 OCIAD1Q9NX40 245 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 ZMAT5Q9UDW3 170 aaKnown RBP15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 CYB5R1Q9UHQ9 305 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 TNRC6BQ9UPQ9 1833 aaKnown RBP15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 CSN2P05814 226 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 GPR85P60893 370 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 RAB11BQ15907 218 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 ACOT7LQ6ZUV0 252 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 ZNF627Q7L945 461 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 ADAMTS18Q8TE60 1221 aa15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 HOXB13Q92826 284 aaPredicted RBP15.41■□□□□ 0.06
SCAMP4-201ENST00000316097 PMM1Q92871 262 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms