RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ZNF680Q8NEM1 530 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 SPACA5Q96QH8 159 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 ZCCHC4Q9H5U6 513 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 C20orf141Q9NUB4 165 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 DSCR3O14972 297 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 LAP3P28838 519 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 CD300LDQ6UXZ3 194 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 TMEM200AQ86VY9 491 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 NUDCD2Q8WVJ2 157 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 TCEAL7Q9BRU2 100 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 HRH3Q9Y5N1 445 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 SPTY2D1-AS1A0A0U1RR47 76 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 LILRB5O75023 590 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 NKX2-2O95096 273 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 CYB561P49447 251 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 OR10K2Q6IF99 312 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 LINC00696Q6ZRV3 163 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 WDSUB1Q8N9V3 476 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 TCEAL2Q9H3H9 227 aaPredicted RBP12.51□□□□□ -0.41
SPAST-201ENST00000315285 PIGMQ9H3S5 423 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 ERVMER34-1Q9H9K5 563 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 BCO1Q9HAY6 547 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 GPR84Q9NQS5 396 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 SLC22A11Q9NSA0 550 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 ZNF223Q9UK11 482 aaPredicted RBP12.51□□□□□ -0.41
SPAST-201ENST00000315285 TCN2P20062 427 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 GPR85P60893 370 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 ZNF266Q14584 549 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 GPNMBQ14956 572 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 FAM122BQ7Z309 247 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 C22orf15Q8WYQ4 148 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 C8orf44Q96CB5 159 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 B9D1Q9UPM9 204 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 NRG2O14511 850 aaPredicted RBP12.5□□□□□ -0.41
SPAST-201ENST00000315285 CTSVO60911 334 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 TMEM127O75204 238 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 SERPINA7P05543 415 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 MRPS34P82930 218 aaKnown RBP12.5□□□□□ -0.41
SPAST-201ENST00000315285 ZNF74Q16587 644 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 FAM122CQ6P4D5 195 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 OR2AK2Q8NG84 335 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 ZNF416Q9BWM5 594 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 TAS2R5Q9NYW4 299 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 TXNL1O43396 289 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 HBE1P02100 147 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 ABOP16442 354 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 EMP3P54852 163 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 TAS2R30P59541 319 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 EXOSC2Q13868 293 aaKnown RBP12.5□□□□□ -0.41
SPAST-201ENST00000315285 SOHLH1Q5JUK2 328 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 ANKRD9Q96BM1 317 aaPredicted RBP12.5□□□□□ -0.41
SPAST-201ENST00000315285 GPR173Q9NS66 373 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 SLC5A6Q9Y289 635 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 LINC01565O15544 149 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 GMDSO60547 372 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 TNFSF4P23510 183 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 SIRT3Q9NTG7 399 aaPredicted RBP12.5□□□□□ -0.41
SPAST-201ENST00000315285 CSAG2Q9Y5P2 127 aa12.5□□□□□ -0.41
SPAST-201ENST00000315285 ARPC4-TTLL3A0A0A6YYG9 625 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 HBG1P69891 147 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 HBG2P69892 147 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 TLE4Q04727 773 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 RNLSQ5VYX0 342 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 SHEQ5VZ18 495 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 ACOT7LQ6ZUV0 252 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 SUMF1Q8NBK3 374 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 PHF7Q9BWX1 381 aaPredicted RBP12.49□□□□□ -0.41
SPAST-201ENST00000315285 OR5H14A6NHG9 310 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 A8MXE2 369 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 GUSBP08236 651 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 ATF1P18846 271 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 GABRA2P47869 451 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 RBP2P50120 134 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 INSL4Q14641 139 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 TEX19Q8NA77 164 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 ZNF784Q8NCA9 323 aaPredicted RBP12.49□□□□□ -0.41
SPAST-201ENST00000315285 SLC30A7Q8NEW0 376 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 OR4C16Q8NGL9 310 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 OR6K3Q8NGY3 331 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 TAAR8Q969N4 342 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 UPRTQ96BW1 309 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 NINQ8N4C6 2090 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 WISP3O95389 354 aaPredicted RBP12.49□□□□□ -0.41
SPAST-201ENST00000315285 OR4E1P0C645 316 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 GALP22466 123 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 TMEM217Q8N7C4 229 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 QPCTLQ9NXS2 382 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 MBD1Q9UIS9 605 aaPredicted RBP12.49□□□□□ -0.41
SPAST-201ENST00000315285 HOXB3P14651 431 aaPredicted RBP12.49□□□□□ -0.41
SPAST-201ENST00000315285 SERPINF1P36955 418 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 DBPQ10586 325 aaPredicted RBP12.49□□□□□ -0.41
SPAST-201ENST00000315285 SNTB1Q13884 538 aaKnown RBP12.49□□□□□ -0.41
SPAST-201ENST00000315285 PDLIM3Q53GG5 364 aaPredicted RBP12.49□□□□□ -0.41
SPAST-201ENST00000315285 OR51A2Q8NGJ7 313 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 SEH1LQ96EE3 360 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 MYOTQ9UBF9 498 aa12.49□□□□□ -0.41
SPAST-201ENST00000315285 XRCC3O43542 346 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 IGHV3-9P01782 118 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 PCK2Q16822 640 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 CPEB2Q7Z5Q1 589 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms