RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 OTOSQ8NHW6 89 aa15.52■□□□□ 0.08
SSSCA1-201ENST00000309328 ZNRF4Q8WWF5 429 aa15.52■□□□□ 0.08
SSSCA1-201ENST00000309328 ASB17Q8WXJ9 295 aa15.52■□□□□ 0.08
SSSCA1-201ENST00000309328 MS4A3Q96HJ5 214 aa15.52■□□□□ 0.08
SSSCA1-201ENST00000309328 ATF6BQ99941 703 aa15.52■□□□□ 0.08
SSSCA1-201ENST00000309328 BCL2L14Q9BZR8 327 aa15.52■□□□□ 0.08
SSSCA1-201ENST00000309328 ELOVL3Q9HB03 270 aa15.52■□□□□ 0.08
SSSCA1-201ENST00000309328 DDX28Q9NUL7 540 aaKnown RBP15.52■□□□□ 0.08
SSSCA1-201ENST00000309328 PCDHGB1Q9Y5G3 927 aa15.52■□□□□ 0.08
SSSCA1-201ENST00000309328 CELSR2Q9HCU4 2923 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 SHISA9B4DS77 424 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 ZNF878C9JN71 531 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 HS3ST1O14792 307 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 APOC1P02654 83 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 CELA3BP08861 270 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 GABRB1P18505 474 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 APEX1P27695 318 aaKnown RBP15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 ATP6V1E1P36543 226 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 RGS6P49758 472 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 GRB2P62993 217 aaKnown RBP15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 IL5RAQ01344 420 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 CCDC92Q53HC0 331 aaPredicted RBP15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 KCTD18Q6PI47 426 aaPredicted RBP15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 DPY19L4Q7Z388 723 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 CDC20BQ86Y33 519 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 C8orf59Q8N0T1 100 aaPredicted RBP15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 TFAP2CQ92754 450 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 FBXW5Q969U6 566 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 SPTSSAQ969W0 71 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 POM121L2Q96KW2 1035 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 HS3ST6Q96QI5 342 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 ZNF442Q9H7R0 627 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 LAMP5Q9UJQ1 280 aa15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 SETXQ7Z333 2677 aaKnown RBP15.51■□□□□ 0.07
SSSCA1-201ENST00000309328 DCHS2Q6V1P9 2916 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 CENPEQ02224 2701 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 C5orf49A4QMS7 147 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 ATP6V1G2-DDX39BF2Z307 99 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 H3BSA7 217 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 M0R129 80 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 LYNP07948 512 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 NR4A1P22736 598 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 MTNR1AP48039 350 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 AQP4P55087 323 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 EIF2B1Q14232 305 aaKnown RBP15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 DEGS2Q6QHC5 323 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 DCXRQ7Z4W1 244 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 LINC00346Q8IVM7 164 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 ZNF611Q8N823 705 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 KBTBD8Q8NFY9 601 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 AKAP1Q92667 903 aaKnown RBP eCLIP15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 DHRS9Q9BPW9 319 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 NIPAL2Q9H841 368 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 DNAJC27Q9NZQ0 273 aa15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 RPL36Q9Y3U8 105 aaKnown RBP15.5■□□□□ 0.07
SSSCA1-201ENST00000309328 IRGMA1A4Y4 181 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 SELENOFO60613 162 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 ENTPD6O75354 484 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 SBK2P0C263 348 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 GLRXP35754 106 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 ACTC1P68032 377 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 ACTA1P68133 377 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 MAD2L1BPQ15013 274 aaPredicted RBP15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 TAF13Q15543 124 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 CORO6Q6QEF8 472 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 LYPD4Q6UWN0 246 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 IZUMO2Q6UXV1 221 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 CFAP77Q6ZQR2 320 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 MYPOPQ86VE0 399 aaPredicted RBP15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 ST7LQ8TDW4 575 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 RNF133Q8WVZ7 376 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 MRPL48Q96GC5 212 aaKnown RBP15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 MAP6Q96JE9 813 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 PLEKHF2Q9H8W4 249 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 SP140LQ9H930 580 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 ADGRL4Q9HBW9 690 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 CA10Q9NS85 328 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 TBCCD1Q9NVR7 557 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 CISD1Q9NZ45 108 aaKnown RBP15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 ATP23Q9Y6H3 246 aa15.49■□□□□ 0.07
SSSCA1-201ENST00000309328 ABHD16AO95870 558 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 OR2T7P0C7T2 308 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 BMP4P12644 408 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 ALOX5APP20292 161 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 CCNOP22674 350 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 CALCRP30988 508 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 APOBEC3AP31941 199 aaPredicted RBP15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 NAA10P41227 235 aaPredicted RBP15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 TPTEP56180 551 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 NKX6-1P78426 367 aaPredicted RBP15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 SNCBQ16143 134 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 HIST2H2BCQ6DN03 193 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 USP51Q70EK9 711 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 THAP5Q7Z6K1 395 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 OR5L1Q8NGL2 311 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 OR2T27Q8NH04 317 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 SLAMF6Q96DU3 332 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 C4orf45Q96LM5 186 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 COPS4Q9BT78 406 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 ABHD6Q9BV23 337 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms